Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a2P25318 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Col8a2P25318 Gm37940-201ENSMUST00000194243 3251 ntBASIC5.23□□□□□ -1.57
Col8a2P25318 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a2P25318 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a2P25318 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a2P25318 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a2P25318 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a2P25318 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a2P25318 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a2P25318 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a2P25318 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a2P25318 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a2P25318 Gm37735-201ENSMUST00000193995 1406 ntBASIC5.23□□□□□ -1.57
Col8a2P25318 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a2P25318 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 AC125328.1-201ENSMUST00000226812 2265 ntBASIC5.22□□□□□ -1.57
Col8a2P25318 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC5.22□□□□□ -1.57
Col8a2P25318 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col8a2P25318 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col8a2P25318 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col8a2P25318 AC154841.1-201ENSMUST00000227263 1479 ntBASIC5.22□□□□□ -1.57
Col8a2P25318 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Gm22953-201ENSMUST00000116724 101 ntBASIC5.22□□□□□ -1.57
Col8a2P25318 Gm11972-201ENSMUST00000118514 389 ntBASIC5.22□□□□□ -1.57
Col8a2P25318 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.22□□□□□ -1.57
Col8a2P25318 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC5.22□□□□□ -1.57
Col8a2P25318 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC5.22□□□□□ -1.57
Col8a2P25318 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Gm22655-201ENSMUST00000174949 96 ntBASIC5.22□□□□□ -1.57
Col8a2P25318 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.22□□□□□ -1.57
Col8a2P25318 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Gm18700-201ENSMUST00000185791 553 ntBASIC5.22□□□□□ -1.57
Col8a2P25318 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC5.22□□□□□ -1.57
Col8a2P25318 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Gm17847-201ENSMUST00000188261 1127 ntBASIC5.22□□□□□ -1.57
Col8a2P25318 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Trbv9-201ENSMUST00000194494 290 ntBASIC5.22□□□□□ -1.57
Col8a2P25318 Gm3544-201ENSMUST00000196129 305 ntBASIC5.22□□□□□ -1.57
Col8a2P25318 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC5.22□□□□□ -1.57
Col8a2P25318 Gm44312-201ENSMUST00000203536 469 ntBASIC5.22□□□□□ -1.57
Col8a2P25318 Gm44809-201ENSMUST00000208305 993 ntBASIC5.22□□□□□ -1.57
Col8a2P25318 Gm44861-201ENSMUST00000208325 1220 ntBASIC5.22□□□□□ -1.57
Col8a2P25318 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC5.22□□□□□ -1.57
Col8a2P25318 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.22□□□□□ -1.57
Col8a2P25318 Gm4803-201ENSMUST00000218729 1279 ntBASIC5.22□□□□□ -1.57
Col8a2P25318 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC5.22□□□□□ -1.57
Col8a2P25318 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col8a2P25318 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col8a2P25318 AC120347.2-201ENSMUST00000222224 2015 ntBASIC5.22□□□□□ -1.57
Col8a2P25318 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC5.22□□□□□ -1.57
Col8a2P25318 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col8a2P25318 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC5.22□□□□□ -1.57
Col8a2P25318 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Gm10650-202ENSMUST00000196581 1969 ntBASIC5.22□□□□□ -1.57
Col8a2P25318 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a2P25318 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Col8a2P25318 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Col8a2P25318 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.21□□□□□ -1.57
Col8a2P25318 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC5.21□□□□□ -1.57
Col8a2P25318 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.57
Col8a2P25318 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
Col8a2P25318 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Col8a2P25318 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC5.21□□□□□ -1.58
Col8a2P25318 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a2P25318 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a2P25318 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a2P25318 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC5.21□□□□□ -1.58
Col8a2P25318 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a2P25318 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a2P25318 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a2P25318 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC5.21□□□□□ -1.58
Col8a2P25318 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a2P25318 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.58
Col8a2P25318 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC5.21□□□□□ -1.58
Col8a2P25318 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a2P25318 Gm14510-201ENSMUST00000116165 1092 ntBASIC5.21□□□□□ -1.58
Col8a2P25318 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC5.21□□□□□ -1.58
Col8a2P25318 Gm12442-201ENSMUST00000118372 338 ntBASIC5.21□□□□□ -1.58
Col8a2P25318 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.21□□□□□ -1.58
Col8a2P25318 Gm23430-201ENSMUST00000122490 314 ntBASIC5.21□□□□□ -1.58
Col8a2P25318 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC5.21□□□□□ -1.58
Col8a2P25318 Gm4660-201ENSMUST00000131499 403 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 117.8 ms