Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clk1P22518 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.13□□□□□ -1.43
Clk1P22518 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clk1P22518 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Clk1P22518 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Clk1P22518 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC6.13□□□□□ -1.43
Clk1P22518 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.13□□□□□ -1.43
Clk1P22518 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clk1P22518 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Clk1P22518 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
Clk1P22518 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Clk1P22518 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clk1P22518 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clk1P22518 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clk1P22518 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Clk1P22518 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clk1P22518 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Clk1P22518 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Clk1P22518 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clk1P22518 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Clk1P22518 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Clk1P22518 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clk1P22518 Gm15311-201ENSMUST00000119682 282 ntBASIC6.12□□□□□ -1.43
Clk1P22518 Gm15305-201ENSMUST00000120354 288 ntBASIC6.12□□□□□ -1.43
Clk1P22518 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC6.12□□□□□ -1.43
Clk1P22518 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Clk1P22518 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Clk1P22518 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
Clk1P22518 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clk1P22518 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.12□□□□□ -1.43
Clk1P22518 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Clk1P22518 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Clk1P22518 Gm6327-201ENSMUST00000171185 1335 ntBASIC6.12□□□□□ -1.43
Clk1P22518 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Clk1P22518 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.12□□□□□ -1.43
Clk1P22518 Gm29383-201ENSMUST00000188284 480 ntBASIC6.12□□□□□ -1.43
Clk1P22518 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.12□□□□□ -1.43
Clk1P22518 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Clk1P22518 Gm37270-201ENSMUST00000194277 330 ntBASIC6.12□□□□□ -1.43
Clk1P22518 Gm37311-201ENSMUST00000195541 2024 ntBASIC6.12□□□□□ -1.43
Clk1P22518 Gm44342-201ENSMUST00000196874 129 ntBASIC6.12□□□□□ -1.43
Clk1P22518 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.12□□□□□ -1.43
Clk1P22518 Gm44383-201ENSMUST00000198940 129 ntBASIC6.12□□□□□ -1.43
Clk1P22518 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC6.12□□□□□ -1.43
Clk1P22518 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clk1P22518 Gm44277-201ENSMUST00000205128 649 ntBASIC6.12□□□□□ -1.43
Clk1P22518 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Clk1P22518 Gm4585-201ENSMUST00000207218 452 ntBASIC6.12□□□□□ -1.43
Clk1P22518 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Clk1P22518 Gm45279-201ENSMUST00000210315 391 ntBASIC6.12□□□□□ -1.43
Clk1P22518 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC6.12□□□□□ -1.43
Clk1P22518 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC6.12□□□□□ -1.43
Clk1P22518 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.12□□□□□ -1.43
Clk1P22518 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Clk1P22518 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Clk1P22518 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC6.12□□□□□ -1.43
Clk1P22518 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC6.12□□□□□ -1.43
Clk1P22518 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.12□□□□□ -1.43
Clk1P22518 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clk1P22518 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clk1P22518 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clk1P22518 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clk1P22518 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clk1P22518 Olfr192-201ENSMUST00000080251 925 ntBASIC6.12□□□□□ -1.43
Clk1P22518 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clk1P22518 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Clk1P22518 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Clk1P22518 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Clk1P22518 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.12□□□□□ -1.43
Clk1P22518 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clk1P22518 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Clk1P22518 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Clk1P22518 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
Clk1P22518 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Clk1P22518 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.11□□□□□ -1.43
Clk1P22518 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.11□□□□□ -1.43
Clk1P22518 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC6.11□□□□□ -1.43
Clk1P22518 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
Clk1P22518 Gm37332-201ENSMUST00000195853 2844 ntBASIC6.11□□□□□ -1.43
Clk1P22518 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Clk1P22518 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Clk1P22518 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.11□□□□□ -1.43
Clk1P22518 Mir678-201ENSMUST00000102114 84 ntBASIC6.11□□□□□ -1.43
Clk1P22518 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Clk1P22518 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC6.11□□□□□ -1.43
Clk1P22518 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC6.11□□□□□ -1.43
Clk1P22518 Gm11501-201ENSMUST00000118039 581 ntBASIC6.11□□□□□ -1.43
Clk1P22518 Gm13265-201ENSMUST00000118090 421 ntBASIC6.11□□□□□ -1.43
Clk1P22518 Gm14870-201ENSMUST00000118414 156 ntBASIC6.11□□□□□ -1.43
Clk1P22518 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Clk1P22518 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.11□□□□□ -1.43
Clk1P22518 Gm4992-201ENSMUST00000120256 768 ntBASIC6.11□□□□□ -1.43
Clk1P22518 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC6.11□□□□□ -1.43
Clk1P22518 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC6.11□□□□□ -1.43
Clk1P22518 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC6.11□□□□□ -1.43
Clk1P22518 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC6.11□□□□□ -1.43
Clk1P22518 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC6.11□□□□□ -1.43
Clk1P22518 Gm24781-201ENSMUST00000157636 117 ntBASIC6.11□□□□□ -1.43
Clk1P22518 Gm24545-201ENSMUST00000158651 85 ntBASIC6.11□□□□□ -1.43
Clk1P22518 Gm24176-201ENSMUST00000158928 121 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms