Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sdc1P18828 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sdc1P18828 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sdc1P18828 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Sdc1P18828 AC158595.1-201ENSMUST00000217989 1435 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
Sdc1P18828 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sdc1P18828 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Sdc1P18828 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC5.05□□□□□ -1.6
Sdc1P18828 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sdc1P18828 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sdc1P18828 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
Sdc1P18828 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Sdc1P18828 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Sdc1P18828 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sdc1P18828 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sdc1P18828 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sdc1P18828 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Sdc1P18828 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sdc1P18828 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sdc1P18828 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sdc1P18828 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Sdc1P18828 Ighv1-67-201ENSMUST00000103538 294 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Sdc1P18828 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sdc1P18828 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Sdc1P18828 Gm13193-201ENSMUST00000117275 225 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 Gm25845-201ENSMUST00000122588 310 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sdc1P18828 Gm10364-202ENSMUST00000153034 1001 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC5.05□□□□□ -1.6
Sdc1P18828 Gm23259-201ENSMUST00000158318 303 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 Gm22949-201ENSMUST00000158562 105 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 Gm3344-201ENSMUST00000169610 603 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 Gm20797-201ENSMUST00000177894 383 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 Gm27160-201ENSMUST00000184837 199 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 Scgb1b25-ps-201ENSMUST00000186419 415 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 Gm37770-201ENSMUST00000192855 772 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 Gm2979-201ENSMUST00000193442 463 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sdc1P18828 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC5.05□□□□□ -1.6
Sdc1P18828 Gm44265-201ENSMUST00000203631 465 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 Gm44258-201ENSMUST00000204925 301 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC5.05□□□□□ -1.6
Sdc1P18828 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC5.05□□□□□ -1.6
Sdc1P18828 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC5.05□□□□□ -1.6
Sdc1P18828 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC5.05□□□□□ -1.6
Sdc1P18828 Gm19056-201ENSMUST00000218220 797 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 AC167222.2-201ENSMUST00000220014 295 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 AC102689.1-201ENSMUST00000220511 1090 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC5.05□□□□□ -1.6
Sdc1P18828 Gm2915-201ENSMUST00000222565 787 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 AC154481.1-201ENSMUST00000223532 331 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 AC154747.4-202ENSMUST00000223826 852 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sdc1P18828 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Sdc1P18828 Gm9801-201ENSMUST00000054860 408 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Sdc1P18828 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Sdc1P18828 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Sdc1P18828 Gm23734-201ENSMUST00000083753 109 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Sdc1P18828 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Sdc1P18828 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC5.05□□□□□ -1.6
Sdc1P18828 Gm17300-201ENSMUST00000172202 1527 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sdc1P18828 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Sdc1P18828 Slco6b1-202ENSMUST00000178359 1778 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
Sdc1P18828 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Sdc1P18828 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sdc1P18828 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sdc1P18828 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 Gm43981-201ENSMUST00000203285 1467 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Sdc1P18828 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.05□□□□□ -1.6
Sdc1P18828 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sdc1P18828 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.04□□□□□ -1.6
Sdc1P18828 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC5.04□□□□□ -1.6
Sdc1P18828 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc1P18828 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc1P18828 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc1P18828 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Sdc1P18828 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc1P18828 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc1P18828 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Sdc1P18828 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.04□□□□□ -1.6
Sdc1P18828 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Sdc1P18828 Igkv12-41-201ENSMUST00000103369 347 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Sdc1P18828 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm15078-201ENSMUST00000118371 782 ntBASIC5.04□□□□□ -1.6
Sdc1P18828 Gm13486-201ENSMUST00000119910 282 ntBASIC5.04□□□□□ -1.6
Sdc1P18828 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC5.04□□□□□ -1.6
Sdc1P18828 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 124.9 ms