Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Chmp6P0C0A3 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Gm6558-201ENSMUST00000191934 1973 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Gm11271-201ENSMUST00000116054 440 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Gm11799-201ENSMUST00000116110 460 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Gm12439-201ENSMUST00000117162 365 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Gm16511-201ENSMUST00000120019 564 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Gm12654-201ENSMUST00000120387 587 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Gm25962-201ENSMUST00000157173 168 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Cfhr3-201ENSMUST00000170441 1022 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Gm8454-201ENSMUST00000196980 811 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Ighv1-83-201ENSMUST00000199643 351 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Gm7663-201ENSMUST00000201151 1240 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 CT009713.1-201ENSMUST00000224828 853 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Gm5321-201ENSMUST00000072050 447 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Gm23238-201ENSMUST00000083007 164 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp6P0C0A3 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Chmp6P0C0A3 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Gm10773-201ENSMUST00000218071 3935 ntBASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Gm11256-201ENSMUST00000118109 829 ntBASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Gm12565-201ENSMUST00000119004 649 ntBASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Gm14300-201ENSMUST00000120800 946 ntBASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Gm12451-201ENSMUST00000121636 633 ntBASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Gm13669-201ENSMUST00000122366 457 ntBASIC6.87□□□□□ -1.31
Chmp6P0C0A3 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Gm23894-201ENSMUST00000158107 313 ntBASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Gm26037-201ENSMUST00000158150 311 ntBASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Gm26353-201ENSMUST00000158224 255 ntBASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Gm23632-201ENSMUST00000175289 125 ntBASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Gm44374-201ENSMUST00000199821 140 ntBASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Gm44163-201ENSMUST00000205140 475 ntBASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.87□□□□□ -1.31
Chmp6P0C0A3 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Gm18601-201ENSMUST00000220831 634 ntBASIC6.87□□□□□ -1.31
Chmp6P0C0A3 Gm18620-201ENSMUST00000222295 324 ntBASIC6.87□□□□□ -1.31
Chmp6P0C0A3 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 279.9 ms