Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 AC166358.9-201ENSMUST00000220653 375 ntBASIC8.15□□□□□ -1.1
Hoxc9P09633 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Hoxc9P09633 AC157572.4-201ENSMUST00000228203 549 ntBASIC8.15□□□□□ -1.1
Hoxc9P09633 CT009600.1-201ENSMUST00000228771 337 ntBASIC8.15□□□□□ -1.1
Hoxc9P09633 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC8.15□□□□□ -1.1
Hoxc9P09633 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Hoxc9P09633 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Hoxc9P09633 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hoxc9P09633 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC8.15□□□□□ -1.11
Hoxc9P09633 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Hoxc9P09633 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Hoxc9P09633 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Hoxc9P09633 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
Hoxc9P09633 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Hoxc9P09633 Gm42544-201ENSMUST00000197868 3242 ntBASIC8.14□□□□□ -1.11
Hoxc9P09633 AC152922.2-201ENSMUST00000213353 3879 ntBASIC8.14□□□□□ -1.11
Hoxc9P09633 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Hoxc9P09633 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hoxc9P09633 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC8.14□□□□□ -1.11
Hoxc9P09633 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hoxc9P09633 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Hoxc9P09633 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hoxc9P09633 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC8.14□□□□□ -1.11
Hoxc9P09633 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC8.14□□□□□ -1.11
Hoxc9P09633 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Hoxc9P09633 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC8.14□□□□□ -1.11
Hoxc9P09633 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hoxc9P09633 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Hoxc9P09633 Gm17934-201ENSMUST00000192818 422 ntBASIC8.14□□□□□ -1.11
Hoxc9P09633 Gm29745-201ENSMUST00000198005 687 ntBASIC8.14□□□□□ -1.11
Hoxc9P09633 Gm43215-201ENSMUST00000199108 252 ntBASIC8.14□□□□□ -1.11
Hoxc9P09633 AC174797.2-203ENSMUST00000224017 716 ntBASIC8.14□□□□□ -1.11
Hoxc9P09633 AC163664.2-201ENSMUST00000228894 459 ntBASIC8.14□□□□□ -1.11
Hoxc9P09633 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hoxc9P09633 Gm24405-201ENSMUST00000083033 167 ntBASIC8.14□□□□□ -1.11
Hoxc9P09633 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC8.14□□□□□ -1.11
Hoxc9P09633 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hoxc9P09633 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Hoxc9P09633 Gm37367-201ENSMUST00000191771 2602 ntBASIC8.14□□□□□ -1.11
Hoxc9P09633 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Hoxc9P09633 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
Hoxc9P09633 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC8.13□□□□□ -1.11
Hoxc9P09633 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hoxc9P09633 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hoxc9P09633 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hoxc9P09633 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Hoxc9P09633 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hoxc9P09633 Gm5512-201ENSMUST00000218013 1353 ntBASIC8.13□□□□□ -1.11
Hoxc9P09633 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hoxc9P09633 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Hoxc9P09633 Gm15616-201ENSMUST00000118662 375 ntBASIC8.13□□□□□ -1.11
Hoxc9P09633 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hoxc9P09633 Gm14457-201ENSMUST00000148069 1161 ntBASIC8.13□□□□□ -1.11
Hoxc9P09633 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hoxc9P09633 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hoxc9P09633 Gm5990-201ENSMUST00000203126 746 ntBASIC8.13□□□□□ -1.11
Hoxc9P09633 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC8.13□□□□□ -1.11
Hoxc9P09633 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC8.13□□□□□ -1.11
Hoxc9P09633 AC154527.1-201ENSMUST00000225809 242 ntBASIC8.13□□□□□ -1.11
Hoxc9P09633 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Hoxc9P09633 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hoxc9P09633 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Hoxc9P09633 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hoxc9P09633 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hoxc9P09633 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Hoxc9P09633 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hoxc9P09633 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Hoxc9P09633 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hoxc9P09633 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hoxc9P09633 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hoxc9P09633 Gm10062-201ENSMUST00000072180 1470 ntBASIC8.13□□□□□ -1.11
Hoxc9P09633 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hoxc9P09633 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hoxc9P09633 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hoxc9P09633 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hoxc9P09633 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hoxc9P09633 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hoxc9P09633 Gm37423-201ENSMUST00000194246 3342 ntBASIC8.12□□□□□ -1.11
Hoxc9P09633 Gm25345-201ENSMUST00000104505 133 ntBASIC8.12□□□□□ -1.11
Hoxc9P09633 Gm23910-201ENSMUST00000104597 132 ntBASIC8.12□□□□□ -1.11
Hoxc9P09633 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Hoxc9P09633 Gm14000-201ENSMUST00000118670 233 ntBASIC8.12□□□□□ -1.11
Hoxc9P09633 Mup-ps28-201ENSMUST00000120686 289 ntBASIC8.12□□□□□ -1.11
Hoxc9P09633 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC8.12□□□□□ -1.11
Hoxc9P09633 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC8.12□□□□□ -1.11
Hoxc9P09633 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Hoxc9P09633 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC8.12□□□□□ -1.11
Hoxc9P09633 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Hoxc9P09633 Gm45196-201ENSMUST00000206751 825 ntBASIC8.12□□□□□ -1.11
Hoxc9P09633 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC8.12□□□□□ -1.11
Hoxc9P09633 AC139568.1-201ENSMUST00000222878 486 ntBASIC8.12□□□□□ -1.11
Hoxc9P09633 CT030645.3-201ENSMUST00000225483 1022 ntBASIC8.12□□□□□ -1.11
Hoxc9P09633 Gm24041-201ENSMUST00000083115 156 ntBASIC8.12□□□□□ -1.11
Hoxc9P09633 Gm26163-201ENSMUST00000083792 178 ntBASIC8.12□□□□□ -1.11
Hoxc9P09633 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hoxc9P09633 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hoxc9P09633 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hoxc9P09633 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Hoxc9P09633 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hoxc9P09633 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms