Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.99□□□□□ -1.29
Scn3aA2ASI5 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Gm15616-201ENSMUST00000118662 375 ntBASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Gm23408-201ENSMUST00000158523 265 ntBASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Gm23050-201ENSMUST00000158775 165 ntBASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Gm26057-201ENSMUST00000178099 165 ntBASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Mir7220-201ENSMUST00000183978 60 ntBASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Mir7653-201ENSMUST00000184358 61 ntBASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Gm8367-201ENSMUST00000186145 887 ntBASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Gm43382-201ENSMUST00000198954 838 ntBASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Gm31861-201ENSMUST00000204563 672 ntBASIC6.99□□□□□ -1.29
Scn3aA2ASI5 AC133650.1-201ENSMUST00000217243 578 ntBASIC6.99□□□□□ -1.29
Scn3aA2ASI5 AC166574.7-201ENSMUST00000228502 704 ntBASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Gm8872-201ENSMUST00000197475 1341 ntBASIC6.99□□□□□ -1.29
Scn3aA2ASI5 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Scn3aA2ASI5 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Gm12193-201ENSMUST00000117250 379 ntBASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Gm13193-201ENSMUST00000117275 225 ntBASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Gm14237-201ENSMUST00000122080 430 ntBASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Snora47-201ENSMUST00000157483 138 ntBASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Gm7152-201ENSMUST00000163570 605 ntBASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Gm42753-201ENSMUST00000196718 1268 ntBASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Gm45734-201ENSMUST00000211916 411 ntBASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Gm16335-201ENSMUST00000077495 309 ntBASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Scn3aA2ASI5 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Scn3aA2ASI5 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Scn3aA2ASI5 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Gm27030-201ENSMUST00000182551 464 ntBASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Gm19060-201ENSMUST00000201959 421 ntBASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Gm45850-201ENSMUST00000212536 338 ntBASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Scn3aA2ASI5 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Scn3aA2ASI5 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Gm13818-201ENSMUST00000119441 511 ntBASIC6.97□□□□□ -1.29
Scn3aA2ASI5 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC6.97□□□□□ -1.29
Scn3aA2ASI5 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Gm22724-201ENSMUST00000158091 127 ntBASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Gm9597-201ENSMUST00000171913 602 ntBASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Mir5110-201ENSMUST00000175537 87 ntBASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.97□□□□□ -1.29
Scn3aA2ASI5 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms