Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Gm28941-201ENSMUST00000185536 1017 ntBASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Gm29605-201ENSMUST00000190800 292 ntBASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Gm8869-201ENSMUST00000195222 947 ntBASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Gm17824-201ENSMUST00000197690 805 ntBASIC6.28□□□□□ -1.4
H2afb2S4R1M3 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Gm18805-201ENSMUST00000206872 655 ntBASIC6.28□□□□□ -1.4
H2afb2S4R1M3 AC073947.1-201ENSMUST00000216991 649 ntBASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 AC167013.4-201ENSMUST00000226712 317 ntBASIC6.28□□□□□ -1.4
H2afb2S4R1M3 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 AC156163.1-201ENSMUST00000215598 3369 ntBASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
H2afb2S4R1M3 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
H2afb2S4R1M3 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Gm11833-201ENSMUST00000118393 853 ntBASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC6.27□□□□□ -1.41
H2afb2S4R1M3 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Gm22711-202ENSMUST00000197029 135 ntBASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Gm44075-201ENSMUST00000204208 216 ntBASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 AC069561.1-201ENSMUST00000213750 424 ntBASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.27□□□□□ -1.41
H2afb2S4R1M3 AC101205.1-201ENSMUST00000227916 907 ntBASIC6.27□□□□□ -1.41
H2afb2S4R1M3 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.27□□□□□ -1.41
H2afb2S4R1M3 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Gm13193-201ENSMUST00000117275 225 ntBASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Gm14173-201ENSMUST00000117690 278 ntBASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Gm8692-201ENSMUST00000118102 438 ntBASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Gm11107-201ENSMUST00000165414 505 ntBASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
H2afb2S4R1M3 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms