Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 AC152922.2-201ENSMUST00000213353 3879 ntBASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx56Q9D0R4 Gm37735-201ENSMUST00000193995 1406 ntBASIC7.09□□□□□ -1.28
Ddx56Q9D0R4 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC7.09□□□□□ -1.28
Ddx56Q9D0R4 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.28
Ddx56Q9D0R4 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Ddx56Q9D0R4 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Ddx56Q9D0R4 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
Ddx56Q9D0R4 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm44897-201ENSMUST00000206187 1341 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 AC131667.1-201ENSMUST00000214665 2175 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm38366-201ENSMUST00000193127 1934 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm15933-201ENSMUST00000117215 616 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm16418-201ENSMUST00000118577 171 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm15153-201ENSMUST00000119867 274 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm12026-201ENSMUST00000120961 1024 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm29197-201ENSMUST00000185922 702 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm37708-201ENSMUST00000192337 895 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm37493-201ENSMUST00000193167 433 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm43160-201ENSMUST00000196453 421 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm44342-201ENSMUST00000196874 129 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm5711-201ENSMUST00000197896 421 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm44383-201ENSMUST00000198940 129 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 AC153847.1-201ENSMUST00000214524 353 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 AC122327.2-201ENSMUST00000220883 120 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm4057-201ENSMUST00000221407 368 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 AC122327.3-201ENSMUST00000221852 120 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm7252-201ENSMUST00000223284 456 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 AC166341.1-201ENSMUST00000223360 105 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 AC124395.1-201ENSMUST00000225940 707 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm15500-201ENSMUST00000071523 894 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm11590-201ENSMUST00000118999 1455 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm15950-201ENSMUST00000162902 1973 ntBASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx56Q9D0R4 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Gm43789-201ENSMUST00000199275 2472 ntBASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Gm44102-201ENSMUST00000204031 1666 ntBASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Gm23748-201ENSMUST00000104227 131 ntBASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Gm14621-201ENSMUST00000117709 689 ntBASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Gm15741-201ENSMUST00000119401 754 ntBASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Gm7212-201ENSMUST00000120817 348 ntBASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Gm20615-201ENSMUST00000177503 705 ntBASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms