Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Clp1Q99LI9 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
Clp1Q99LI9 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
Clp1Q99LI9 Gm42514-201ENSMUST00000196636 1832 ntBASIC7.73□□□□□ -1.17
Clp1Q99LI9 CT009757.6-201ENSMUST00000220661 2312 ntBASIC7.73□□□□□ -1.17
Clp1Q99LI9 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Clp1Q99LI9 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Clp1Q99LI9 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Clp1Q99LI9 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
Clp1Q99LI9 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Cherp-201ENSMUST00000079510 3713 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm37520-201ENSMUST00000194883 2672 ntBASIC7.72□□□□□ -1.17
Clp1Q99LI9 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Clp1Q99LI9 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm45174-201ENSMUST00000208884 3065 ntBASIC7.72□□□□□ -1.17
Clp1Q99LI9 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm15185-201ENSMUST00000117397 746 ntBASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm13607-201ENSMUST00000117875 539 ntBASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm24781-201ENSMUST00000157636 117 ntBASIC7.72□□□□□ -1.17
Clp1Q99LI9 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm18417-201ENSMUST00000176564 648 ntBASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm9285-201ENSMUST00000177691 697 ntBASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm21877-201ENSMUST00000185640 694 ntBASIC7.72□□□□□ -1.17
Clp1Q99LI9 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm29234-201ENSMUST00000187452 1262 ntBASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm29263-201ENSMUST00000188718 463 ntBASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm7867-201ENSMUST00000189856 546 ntBASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm18699-201ENSMUST00000190713 243 ntBASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm28266-201ENSMUST00000191410 439 ntBASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm38840-201ENSMUST00000204716 843 ntBASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm45034-201ENSMUST00000206831 482 ntBASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm9357-201ENSMUST00000207138 805 ntBASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm5831-201ENSMUST00000216016 1209 ntBASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC7.72□□□□□ -1.17
Clp1Q99LI9 AC132587.1-201ENSMUST00000220562 166 ntBASIC7.72□□□□□ -1.17
Clp1Q99LI9 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Clp1Q99LI9 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm6679-201ENSMUST00000191467 1869 ntBASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Clp1Q99LI9 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm9314-201ENSMUST00000199881 1528 ntBASIC7.72□□□□□ -1.17
Clp1Q99LI9 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Clp1Q99LI9 Gm2654-201ENSMUST00000221381 1592 ntBASIC7.71□□□□□ -1.17
Clp1Q99LI9 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Clp1Q99LI9 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Clp1Q99LI9 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC7.71□□□□□ -1.17
Clp1Q99LI9 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Clp1Q99LI9 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Clp1Q99LI9 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Clp1Q99LI9 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.17
Clp1Q99LI9 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Clp1Q99LI9 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Clp1Q99LI9 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Clp1Q99LI9 Grik1-210ENSMUST00000228034 2708 ntBASIC7.71□□□□□ -1.18
Clp1Q99LI9 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Clp1Q99LI9 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC7.71□□□□□ -1.18
Clp1Q99LI9 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Clp1Q99LI9 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Clp1Q99LI9 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Clp1Q99LI9 Gm16073-201ENSMUST00000116032 517 ntBASIC7.71□□□□□ -1.18
Clp1Q99LI9 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC7.71□□□□□ -1.18
Clp1Q99LI9 Gm15203-201ENSMUST00000117668 455 ntBASIC7.71□□□□□ -1.18
Clp1Q99LI9 Gm13196-201ENSMUST00000118297 379 ntBASIC7.71□□□□□ -1.18
Clp1Q99LI9 Gm13640-201ENSMUST00000118445 264 ntBASIC7.71□□□□□ -1.18
Clp1Q99LI9 Gm5601-201ENSMUST00000118909 972 ntBASIC7.71□□□□□ -1.18
Clp1Q99LI9 Apc-ps1-201ENSMUST00000119356 470 ntBASIC7.71□□□□□ -1.18
Clp1Q99LI9 Gm12706-201ENSMUST00000121588 698 ntBASIC7.71□□□□□ -1.18
Clp1Q99LI9 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Clp1Q99LI9 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Clp1Q99LI9 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Clp1Q99LI9 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC7.71□□□□□ -1.18
Clp1Q99LI9 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC7.71□□□□□ -1.18
Clp1Q99LI9 Gm25969-201ENSMUST00000157166 132 ntBASIC7.71□□□□□ -1.18
Clp1Q99LI9 Gm26393-201ENSMUST00000157625 129 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms