Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 AC159624.1-201ENSMUST00000217762 1344 ntBASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Gm11864-201ENSMUST00000116179 1220 ntBASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Gm16511-201ENSMUST00000120019 564 ntBASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Gm13735-201ENSMUST00000120217 670 ntBASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Gm15842-201ENSMUST00000120513 618 ntBASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Mir5617-201ENSMUST00000176786 57 ntBASIC6.11□□□□□ -1.43
Lsm1Q8VC85 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Gm29778-201ENSMUST00000201667 466 ntBASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Gm3549-201ENSMUST00000203873 794 ntBASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.11□□□□□ -1.43
Lsm1Q8VC85 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm24790-201ENSMUST00000104285 132 ntBASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm12842-201ENSMUST00000117298 476 ntBASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm12573-201ENSMUST00000118158 286 ntBASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm13455-201ENSMUST00000118767 517 ntBASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm15750-201ENSMUST00000120970 616 ntBASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm11761-201ENSMUST00000121392 445 ntBASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm7599-201ENSMUST00000121453 796 ntBASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm23426-201ENSMUST00000122483 318 ntBASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm23756-201ENSMUST00000157582 114 ntBASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm25435-201ENSMUST00000158277 267 ntBASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm7289-201ENSMUST00000168993 734 ntBASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Ighv1-17-201ENSMUST00000194435 350 ntBASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm37526-201ENSMUST00000194640 619 ntBASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm9504-201ENSMUST00000196322 468 ntBASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm8190-201ENSMUST00000199603 586 ntBASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm43459-201ENSMUST00000202093 331 ntBASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm6850-201ENSMUST00000210031 530 ntBASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm9685-201ENSMUST00000211275 538 ntBASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms