Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ccdc28aQ8CEI3 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 AC118639.1-203ENSMUST00000228425 2016 ntBASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gm12778-201ENSMUST00000122341 333 ntBASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gm23077-201ENSMUST00000157854 116 ntBASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gm25675-201ENSMUST00000174979 118 ntBASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gm42696-201ENSMUST00000199859 1142 ntBASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gm9419-201ENSMUST00000200672 567 ntBASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gm43459-201ENSMUST00000202093 331 ntBASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gm19340-201ENSMUST00000221995 345 ntBASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gm19154-201ENSMUST00000223330 940 ntBASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 AC133598.4-201ENSMUST00000224577 454 ntBASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ccdc28aQ8CEI3 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Naip3-201ENSMUST00000118082 4208 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Gm14584-201ENSMUST00000118956 637 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Gm11617-201ENSMUST00000119609 639 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Gm15842-201ENSMUST00000120513 618 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Gm5578-201ENSMUST00000121490 1236 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Gm3140-201ENSMUST00000163523 481 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Gm43048-201ENSMUST00000196101 388 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Gm4585-201ENSMUST00000207218 452 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 AV026068-218ENSMUST00000223980 575 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 AC131117.2-202ENSMUST00000224539 547 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc28aQ8CEI3 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms