Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Alx1Q8C8B0 AC156025.2-201ENSMUST00000225907 1533 ntBASIC7.35□□□□□ -1.23
Alx1Q8C8B0 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Alx1Q8C8B0 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Alx1Q8C8B0 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Alx1Q8C8B0 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Alx1Q8C8B0 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Alx1Q8C8B0 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Alx1Q8C8B0 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Alx1Q8C8B0 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Alx1Q8C8B0 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Gm22714-201ENSMUST00000116894 78 ntBASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Gm7658-201ENSMUST00000119064 1124 ntBASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Gm12307-201ENSMUST00000120581 590 ntBASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Gm11925-201ENSMUST00000121375 535 ntBASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Gm6541-201ENSMUST00000165542 561 ntBASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Gm17137-202ENSMUST00000165729 957 ntBASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Gm20778-201ENSMUST00000178524 627 ntBASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Gm37177-201ENSMUST00000193768 417 ntBASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Gm18839-201ENSMUST00000204292 670 ntBASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 AC165292.1-201ENSMUST00000215218 620 ntBASIC7.34□□□□□ -1.23
Alx1Q8C8B0 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Gm3266-201ENSMUST00000217832 591 ntBASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 AC160114.2-201ENSMUST00000223021 300 ntBASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Gm10062-201ENSMUST00000072180 1470 ntBASIC7.34□□□□□ -1.23
Alx1Q8C8B0 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Alx1Q8C8B0 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Alx1Q8C8B0 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Alx1Q8C8B0 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Alx1Q8C8B0 AC164107.1-202ENSMUST00000228953 1816 ntBASIC7.34□□□□□ -1.24
Alx1Q8C8B0 Gm14895-201ENSMUST00000121858 1361 ntBASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 AC166358.5-201ENSMUST00000220706 1302 ntBASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm43425-201ENSMUST00000201793 3291 ntBASIC7.33□□□□□ -1.24
Alx1Q8C8B0 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm13811-201ENSMUST00000117800 256 ntBASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm13338-201ENSMUST00000120235 361 ntBASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm14331-201ENSMUST00000120396 409 ntBASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm12890-201ENSMUST00000120885 373 ntBASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm20620-201ENSMUST00000177528 168 ntBASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm28080-201ENSMUST00000188552 722 ntBASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm21524-201ENSMUST00000190499 696 ntBASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm21715-201ENSMUST00000191056 694 ntBASIC7.33□□□□□ -1.24
Alx1Q8C8B0 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm4083-201ENSMUST00000207158 451 ntBASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm9292-201ENSMUST00000222008 710 ntBASIC7.33□□□□□ -1.24
Alx1Q8C8B0 AC129537.1-201ENSMUST00000226596 1228 ntBASIC7.33□□□□□ -1.24
Alx1Q8C8B0 AC131029.2-201ENSMUST00000226696 628 ntBASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Gm43190-201ENSMUST00000187850 1779 ntBASIC7.33□□□□□ -1.24
Alx1Q8C8B0 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 103.9 ms