Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gm37647-201ENSMUST00000194556 3143 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gm12643-201ENSMUST00000116078 374 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gm23883-201ENSMUST00000122686 290 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gm24685-201ENSMUST00000157764 285 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gm16580-201ENSMUST00000162696 1044 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gm23379-201ENSMUST00000180026 107 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gm26587-201ENSMUST00000180795 989 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gm18406-201ENSMUST00000185872 669 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gm29141-201ENSMUST00000190357 882 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gm38075-201ENSMUST00000191979 920 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gm38279-201ENSMUST00000194067 1131 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gm8921-201ENSMUST00000204306 649 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gm18559-201ENSMUST00000208249 604 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 AC154747.4-201ENSMUST00000224802 903 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 AC137871.3-201ENSMUST00000226628 225 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gm42969-201ENSMUST00000199858 3631 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 AC134917.1-201ENSMUST00000220517 1449 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gm45477-201ENSMUST00000200213 5498 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gm8844-201ENSMUST00000119460 2614 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Gm10623-201ENSMUST00000209081 2639 ntBASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim47Q8C0E3 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm43872-201ENSMUST00000203218 2213 ntBASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm19028-201ENSMUST00000189614 1873 ntBASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm15054-201ENSMUST00000117393 281 ntBASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm12837-201ENSMUST00000120131 373 ntBASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm12026-201ENSMUST00000120961 1024 ntBASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm22025-201ENSMUST00000122734 302 ntBASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm2735-201ENSMUST00000136133 277 ntBASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm26355-201ENSMUST00000158220 105 ntBASIC8.26□□□□□ -1.09
Trim47Q8C0E3 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm6489-201ENSMUST00000178167 696 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms