Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm8715-201ENSMUST00000162728 531 ntBASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Gm9064-201ENSMUST00000163579 566 ntBASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Olfr331-202ENSMUST00000170501 957 ntBASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Gm20432-201ENSMUST00000173716 250 ntBASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Mir6348-201ENSMUST00000183804 120 ntBASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Gm6681-201ENSMUST00000205215 607 ntBASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Gm2754-201ENSMUST00000223383 589 ntBASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 AC132317.2-201ENSMUST00000227301 519 ntBASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Gm8177-201ENSMUST00000181591 1336 ntBASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Naip3-201ENSMUST00000118082 4208 ntBASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Gm12535-201ENSMUST00000121025 484 ntBASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Gm5166-201ENSMUST00000121332 573 ntBASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Gm26595-201ENSMUST00000181585 484 ntBASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Mir6908-201ENSMUST00000184056 63 ntBASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Gm37270-201ENSMUST00000194277 330 ntBASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Gm43396-201ENSMUST00000197506 706 ntBASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 AC155834.1-201ENSMUST00000220033 498 ntBASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Gm45657-201ENSMUST00000211318 1349 ntBASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.72□□□□□ -1.33
Ccdc40Q8BI79 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ccdc40Q8BI79 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ccdc40Q8BI79 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Ccdc40Q8BI79 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Ccdc40Q8BI79 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc40Q8BI79 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Ccdc40Q8BI79 Gm25760-201ENSMUST00000103989 132 ntBASIC6.71□□□□□ -1.34
Ccdc40Q8BI79 Gm24888-201ENSMUST00000104387 130 ntBASIC6.71□□□□□ -1.34
Ccdc40Q8BI79 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Ccdc40Q8BI79 Gm11553-201ENSMUST00000120682 240 ntBASIC6.71□□□□□ -1.34
Ccdc40Q8BI79 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc40Q8BI79 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc40Q8BI79 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.71□□□□□ -1.34
Ccdc40Q8BI79 Gm22820-201ENSMUST00000157205 329 ntBASIC6.71□□□□□ -1.34
Ccdc40Q8BI79 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc40Q8BI79 Gm26381-201ENSMUST00000174895 92 ntBASIC6.71□□□□□ -1.34
Ccdc40Q8BI79 Gm23162-201ENSMUST00000175081 121 ntBASIC6.71□□□□□ -1.34
Ccdc40Q8BI79 Gm25617-201ENSMUST00000179548 133 ntBASIC6.71□□□□□ -1.34
Ccdc40Q8BI79 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc40Q8BI79 Gm27762-201ENSMUST00000183417 109 ntBASIC6.71□□□□□ -1.34
Ccdc40Q8BI79 Mir7005-201ENSMUST00000185089 69 ntBASIC6.71□□□□□ -1.34
Ccdc40Q8BI79 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
Ccdc40Q8BI79 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC6.71□□□□□ -1.34
Ccdc40Q8BI79 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms