Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm22992-201ENSMUST00000179496 121 ntBASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Gm25892-201ENSMUST00000179867 121 ntBASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Gm25891-201ENSMUST00000180050 132 ntBASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Gm24092-201ENSMUST00000180257 121 ntBASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Mir7008-201ENSMUST00000184398 63 ntBASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Gm7891-201ENSMUST00000190284 843 ntBASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Gm8009-201ENSMUST00000191672 436 ntBASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Gm37187-201ENSMUST00000193425 341 ntBASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Gm42983-201ENSMUST00000199879 815 ntBASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 AC105950.1-201ENSMUST00000222637 408 ntBASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 AC154633.1-201ENSMUST00000223276 449 ntBASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 AC154562.1-201ENSMUST00000226140 966 ntBASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Mir298-201ENSMUST00000083476 82 ntBASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx55Q6ZPL9 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Gm10826-201ENSMUST00000215366 3304 ntBASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Gm44620-201ENSMUST00000209183 2887 ntBASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Gm18632-201ENSMUST00000222597 2087 ntBASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Gm42516-201ENSMUST00000198691 767 ntBASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Gm43176-201ENSMUST00000199653 2989 ntBASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Gm43531-201ENSMUST00000200676 1114 ntBASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Gm4290-201ENSMUST00000206897 814 ntBASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Gm45185-201ENSMUST00000207556 404 ntBASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 CT485607.3-201ENSMUST00000213361 672 ntBASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Gm18592-201ENSMUST00000221529 276 ntBASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 AC122459.2-201ENSMUST00000227099 638 ntBASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Gm24454-201ENSMUST00000083349 132 ntBASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Gm37906-201ENSMUST00000192050 3035 ntBASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx55Q6ZPL9 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Ddx55Q6ZPL9 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Ddx55Q6ZPL9 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Ddx55Q6ZPL9 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Ddx55Q6ZPL9 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Ddx55Q6ZPL9 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Ddx55Q6ZPL9 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC7.46□□□□□ -1.21
Ddx55Q6ZPL9 Gm44215-201ENSMUST00000204910 2711 ntBASIC7.46□□□□□ -1.21
Ddx55Q6ZPL9 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Ddx55Q6ZPL9 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Ddx55Q6ZPL9 AC136019.1-201ENSMUST00000226503 1412 ntBASIC7.46□□□□□ -1.21
Ddx55Q6ZPL9 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Ddx55Q6ZPL9 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Ddx55Q6ZPL9 Gm15421-202ENSMUST00000118224 399 ntBASIC7.46□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms