Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Gm34297-201ENSMUST00000218569 1980 ntTSL 5 BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 A330076C08Rik-202ENSMUST00000223513 1937 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 AC158981.2-201ENSMUST00000227565 1537 ntBASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Gm45537-201ENSMUST00000211539 2708 ntBASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 D7Ertd443e-203ENSMUST00000172947 2559 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Gm12421-201ENSMUST00000119071 307 ntBASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Gm15452-201ENSMUST00000119877 240 ntBASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Gm12455-201ENSMUST00000121242 416 ntBASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Gm4908-201ENSMUST00000121923 1005 ntBASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Fam187b-202ENSMUST00000128384 1244 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Gm25970-201ENSMUST00000157165 86 ntBASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Gm24910-201ENSMUST00000157289 272 ntBASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Gm20451-201ENSMUST00000173452 273 ntBASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Gm7094-201ENSMUST00000178379 366 ntBASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Gm29551-201ENSMUST00000190913 698 ntBASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Gm33354-201ENSMUST00000195448 906 ntBASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Abracl-201ENSMUST00000020002 846 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Gm46342-201ENSMUST00000223411 602 ntBASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 AC170810.1-201ENSMUST00000228267 672 ntBASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 AC158954.1-201ENSMUST00000228272 1006 ntBASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Klk4-201ENSMUST00000007161 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Gm43970-201ENSMUST00000204346 3605 ntBASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Tsr1Q5SWD9 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Cyp2d12-201ENSMUST00000068861 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm17841-201ENSMUST00000210711 2425 ntBASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Ms4a6d-201ENSMUST00000025582 1418 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Serpina3k-201ENSMUST00000043058 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Eftud2-201ENSMUST00000021306 3324 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm26002-201ENSMUST00000101915 107 ntBASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm22927-201ENSMUST00000104268 131 ntBASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Pcna-ps1-201ENSMUST00000118453 738 ntBASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm14001-201ENSMUST00000118847 247 ntBASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm6136-201ENSMUST00000120149 891 ntBASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm14785-201ENSMUST00000120185 539 ntBASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm15791-201ENSMUST00000120365 319 ntBASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Lrrc18-203ENSMUST00000120866 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm15520-201ENSMUST00000132097 1203 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm23259-201ENSMUST00000158318 303 ntBASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm22076-201ENSMUST00000158601 84 ntBASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Med6-204ENSMUST00000161211 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm16556-201ENSMUST00000162608 471 ntTSL 5 BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm21013-201ENSMUST00000184952 1201 ntBASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm29577-201ENSMUST00000186427 693 ntBASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Kmt5a-212ENSMUST00000198451 1032 ntTSL 3 BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm21040-201ENSMUST00000199493 1132 ntBASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm42760-201ENSMUST00000199814 311 ntBASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm8930-201ENSMUST00000201693 768 ntBASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm45508-201ENSMUST00000209298 299 ntBASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Msra-204ENSMUST00000210363 1042 ntTSL 5 BASIC8.65□□□□□ -1.02
Tsr1Q5SWD9 Gm45295-201ENSMUST00000210393 1046 ntBASIC8.65□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms