Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Gm37877-201ENSMUST00000191630 2709 ntBASIC12.97□□□□□ -0.33
Trim41Q5NCC3 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Gm5402-201ENSMUST00000119588 1618 ntBASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Gm12635-201ENSMUST00000117285 752 ntBASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Gm11920-201ENSMUST00000118491 563 ntBASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Gm11902-201ENSMUST00000118849 270 ntBASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Gm12959-201ENSMUST00000119396 403 ntBASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Gm13508-201ENSMUST00000121639 775 ntBASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Gm23139-201ENSMUST00000179454 132 ntBASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Gm25120-201ENSMUST00000180148 79 ntBASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Gm37620-201ENSMUST00000192910 501 ntBASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Gm43945-201ENSMUST00000203595 754 ntBASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Gm9373-201ENSMUST00000208724 599 ntBASIC12.96□□□□□ -0.33
Trim41Q5NCC3 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 CT033778.1-201ENSMUST00000224767 767 ntBASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Gm6863-201ENSMUST00000052882 636 ntBASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Gm10115-201ENSMUST00000076071 1228 ntBASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Gm26064-201ENSMUST00000083381 109 ntBASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Gm22351-201ENSMUST00000083925 107 ntBASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Gm10221-201ENSMUST00000088299 309 ntBASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim41Q5NCC3 Gm37570-201ENSMUST00000195411 3106 ntBASIC12.96□□□□□ -0.34
Trim41Q5NCC3 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim41Q5NCC3 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 AC159635.1-201ENSMUST00000220905 2102 ntBASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Gm12006-201ENSMUST00000120786 403 ntBASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Gm15538-201ENSMUST00000121410 313 ntBASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Gm15790-201ENSMUST00000161109 1251 ntBASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Gm17085-201ENSMUST00000165425 502 ntBASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Gm26784-201ENSMUST00000181666 410 ntBASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Gm10136-201ENSMUST00000183196 435 ntBASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Gm28266-201ENSMUST00000191410 439 ntBASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Gm19035-202ENSMUST00000194575 959 ntBASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 AC079644.1-201ENSMUST00000220586 405 ntBASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Olfr683-201ENSMUST00000061284 960 ntBASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Gm25810-201ENSMUST00000082752 108 ntBASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 AC154522.1-201ENSMUST00000224647 1903 ntBASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim41Q5NCC3 Gm7842-201ENSMUST00000217691 1379 ntBASIC12.94□□□□□ -0.34
Trim41Q5NCC3 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms