Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Pogz-204ENSMUST00000107269 5966 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm44178-201ENSMUST00000205229 2930 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm24886-201ENSMUST00000104384 123 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Mir1188-201ENSMUST00000116756 120 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm13033-201ENSMUST00000117591 1057 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm16423-201ENSMUST00000120078 947 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm14331-201ENSMUST00000120396 409 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm22895-201ENSMUST00000157508 308 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm8999-201ENSMUST00000204951 969 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 AC154527.1-201ENSMUST00000225809 242 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm22300-201ENSMUST00000082661 126 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 n-R5s89-201ENSMUST00000083532 104 ntBASIC7.81□□□□□ -1.16
Shank3Q4ACU6 Gm37738-201ENSMUST00000192396 4716 ntBASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Gm43900-201ENSMUST00000204868 2669 ntBASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Polq-201ENSMUST00000054034 8552 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Gm37233-201ENSMUST00000192173 6263 ntBASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 AC158537.1-201ENSMUST00000224637 1711 ntBASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Tbc1d24-202ENSMUST00000040474 6269 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Ank1-213ENSMUST00000141784 6566 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Gm43343-201ENSMUST00000202454 1926 ntBASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Gm13866-201ENSMUST00000118901 968 ntBASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Gm23553-201ENSMUST00000157817 295 ntBASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Gm9320-201ENSMUST00000184151 473 ntBASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Mir6337-201ENSMUST00000184194 105 ntBASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Gm45457-201ENSMUST00000209931 3089 ntBASIC7.8□□□□□ -1.16
Shank3Q4ACU6 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Shank3Q4ACU6 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 AC122881.1-201ENSMUST00000225757 2695 ntBASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Fam168a-202ENSMUST00000107042 6388 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Gm25415-201ENSMUST00000104220 132 ntBASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Gm14115-201ENSMUST00000119242 482 ntBASIC7.79□□□□□ -1.16
Shank3Q4ACU6 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Gm11197-201ENSMUST00000145158 839 ntBASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Gm6611-201ENSMUST00000163830 1272 ntBASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Gm8367-201ENSMUST00000186145 887 ntBASIC7.79□□□□□ -1.16
Shank3Q4ACU6 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 n-R5s46-201ENSMUST00000083960 116 ntBASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Gm43258-201ENSMUST00000200312 1950 ntBASIC7.79□□□□□ -1.16
Shank3Q4ACU6 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Cdh23-204ENSMUST00000105463 10991 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC7.79□□□□□ -1.16
Shank3Q4ACU6 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shank3Q4ACU6 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms