Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Gm12439-201ENSMUST00000117162 365 ntBASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Gm15901-201ENSMUST00000117663 941 ntBASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Gm14755-201ENSMUST00000118037 384 ntBASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Gm12713-201ENSMUST00000118404 764 ntBASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Gm12929-201ENSMUST00000122406 370 ntBASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Gm21614-201ENSMUST00000183260 1005 ntBASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Gm10108-201ENSMUST00000078246 319 ntBASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.32
Upf3bQ3ULL6 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.77□□□□□ -1.32
Upf3bQ3ULL6 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC6.77□□□□□ -1.32
Upf3bQ3ULL6 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.32
Upf3bQ3ULL6 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Gm22710-201ENSMUST00000116892 125 ntBASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Gm21877-201ENSMUST00000185640 694 ntBASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Gm18103-201ENSMUST00000216621 779 ntBASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Gm7413-201ENSMUST00000219498 462 ntBASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Gm18628-201ENSMUST00000220584 475 ntBASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Upf3bQ3ULL6 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Gm14356-201ENSMUST00000118322 869 ntBASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Gm12040-201ENSMUST00000118357 537 ntBASIC6.76□□□□□ -1.33
Upf3bQ3ULL6 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 106.3 ms