Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Sox9Q04887 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC7.12□□□□□ -1.27
Sox9Q04887 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox9Q04887 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox9Q04887 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox9Q04887 AC159476.1-201ENSMUST00000215914 1668 ntBASIC7.12□□□□□ -1.27
Sox9Q04887 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sox9Q04887 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox9Q04887 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Sox9Q04887 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sox9Q04887 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox9Q04887 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sox9Q04887 Gm6300-201ENSMUST00000192393 1498 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Sox9Q04887 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Sox9Q04887 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 AC122356.1-202ENSMUST00000227328 2758 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Sox9Q04887 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Sox9Q04887 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Gm23739-201ENSMUST00000102295 108 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Gm14733-201ENSMUST00000117680 133 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Sox9Q04887 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
Sox9Q04887 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Sox9Q04887 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC7.11□□□□□ -1.27
Sox9Q04887 Gm26167-201ENSMUST00000158423 253 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC7.11□□□□□ -1.27
Sox9Q04887 Gm4540-201ENSMUST00000170669 429 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Gm3715-201ENSMUST00000172308 617 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Gm4956-202ENSMUST00000178869 672 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Gm28353-201ENSMUST00000186482 570 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Gm28614-201ENSMUST00000186483 458 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Gm28533-201ENSMUST00000186741 570 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Gm29519-201ENSMUST00000186994 398 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Gm29234-201ENSMUST00000187452 1262 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC7.11□□□□□ -1.27
Sox9Q04887 Gm28377-201ENSMUST00000189695 720 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Gm28766-201ENSMUST00000191086 234 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC7.11□□□□□ -1.27
Sox9Q04887 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Gm44239-201ENSMUST00000204228 271 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Gm44770-201ENSMUST00000205395 1264 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Gm20074-201ENSMUST00000208144 484 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Gm2774-201ENSMUST00000213650 1165 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC7.11□□□□□ -1.27
Sox9Q04887 AL929555.1-201ENSMUST00000215283 509 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Gm33312-201ENSMUST00000222443 332 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 AV026068-216ENSMUST00000223874 328 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 AV026068-218ENSMUST00000223980 575 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 AC154184.2-201ENSMUST00000225335 349 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 AC159242.1-201ENSMUST00000225832 194 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 AC121542.1-201ENSMUST00000227245 721 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Gm24924-201ENSMUST00000084007 164 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Sox9Q04887 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC7.11□□□□□ -1.27
Sox9Q04887 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Sox9Q04887 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Sox9Q04887 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 AC158981.2-201ENSMUST00000227565 1537 ntBASIC7.11□□□□□ -1.27
Sox9Q04887 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox9Q04887 Gm43279-201ENSMUST00000202376 2512 ntBASIC7.1□□□□□ -1.27
Sox9Q04887 Gm43534-201ENSMUST00000197685 2853 ntBASIC7.1□□□□□ -1.27
Sox9Q04887 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sox9Q04887 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sox9Q04887 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sox9Q04887 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox9Q04887 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox9Q04887 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC7.1□□□□□ -1.27
Sox9Q04887 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox9Q04887 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox9Q04887 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
Sox9Q04887 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC7.1□□□□□ -1.27
Sox9Q04887 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC7.1□□□□□ -1.27
Sox9Q04887 Gm13451-201ENSMUST00000117649 592 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms