Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC4.2□□□□□ -1.74
PrkdcP97313 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PrkdcP97313 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PrkdcP97313 Srgap3-203ENSMUST00000113169 8300 ntTSL 5 BASIC4.2□□□□□ -1.74
PrkdcP97313 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PrkdcP97313 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC4.2□□□□□ -1.74
PrkdcP97313 Gm10764-202ENSMUST00000220397 2335 ntBASIC4.2□□□□□ -1.74
PrkdcP97313 Dlc1-206ENSMUST00000163663 5113 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PrkdcP97313 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PrkdcP97313 Gm24160-201ENSMUST00000104594 126 ntBASIC4.2□□□□□ -1.74
PrkdcP97313 H3f3c-201ENSMUST00000119459 411 ntBASIC4.2□□□□□ -1.74
PrkdcP97313 Atf1-ps-201ENSMUST00000120608 810 ntBASIC4.2□□□□□ -1.74
PrkdcP97313 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.2□□□□□ -1.74
PrkdcP97313 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC4.2□□□□□ -1.74
PrkdcP97313 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.2□□□□□ -1.74
PrkdcP97313 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC4.2□□□□□ -1.74
PrkdcP97313 Gm43078-201ENSMUST00000197222 168 ntBASIC4.2□□□□□ -1.74
PrkdcP97313 Gm5119-201ENSMUST00000215858 634 ntBASIC4.2□□□□□ -1.74
PrkdcP97313 Zfp429-203ENSMUST00000224684 524 ntBASIC4.2□□□□□ -1.74
PrkdcP97313 AC116319.2-201ENSMUST00000228159 984 ntBASIC4.2□□□□□ -1.74
PrkdcP97313 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PrkdcP97313 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PrkdcP97313 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PrkdcP97313 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PrkdcP97313 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PrkdcP97313 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PrkdcP97313 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PrkdcP97313 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PrkdcP97313 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PrkdcP97313 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC4.2□□□□□ -1.74
PrkdcP97313 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PrkdcP97313 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PrkdcP97313 AC141476.1-201ENSMUST00000224988 3387 ntBASIC4.2□□□□□ -1.74
PrkdcP97313 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PrkdcP97313 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.19□□□□□ -1.74
PrkdcP97313 Arnt2-207ENSMUST00000208232 6047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PrkdcP97313 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PrkdcP97313 Gm12988-201ENSMUST00000119054 478 ntBASIC4.19□□□□□ -1.74
PrkdcP97313 Gm12190-201ENSMUST00000120001 187 ntBASIC4.19□□□□□ -1.74
PrkdcP97313 Gm37932-201ENSMUST00000192258 1167 ntBASIC4.19□□□□□ -1.74
PrkdcP97313 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC4.19□□□□□ -1.74
PrkdcP97313 Gm45228-201ENSMUST00000206585 352 ntBASIC4.19□□□□□ -1.74
PrkdcP97313 Gm28392-201ENSMUST00000077630 393 ntBASIC4.19□□□□□ -1.74
PrkdcP97313 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PrkdcP97313 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Patj-202ENSMUST00000041284 7340 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PrkdcP97313 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PrkdcP97313 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
PrkdcP97313 Sec24c-201ENSMUST00000048657 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PrkdcP97313 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC4.19□□□□□ -1.74
PrkdcP97313 Gm28973-201ENSMUST00000189310 613 ntBASIC4.19□□□□□ -1.74
PrkdcP97313 Gm37774-201ENSMUST00000194401 245 ntBASIC4.19□□□□□ -1.74
PrkdcP97313 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC4.19□□□□□ -1.74
PrkdcP97313 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PrkdcP97313 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC4.19□□□□□ -1.74
PrkdcP97313 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 AC166574.1-201ENSMUST00000226916 1309 ntBASIC4.19□□□□□ -1.74
PrkdcP97313 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
PrkdcP97313 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PrkdcP97313 Hipk1-203ENSMUST00000118317 7939 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PrkdcP97313 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Gm15971-201ENSMUST00000119372 211 ntBASIC4.19□□□□□ -1.74
PrkdcP97313 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC4.19□□□□□ -1.74
PrkdcP97313 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC4.19□□□□□ -1.74
PrkdcP97313 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Gm18752-201ENSMUST00000192876 608 ntBASIC4.19□□□□□ -1.74
PrkdcP97313 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC4.19□□□□□ -1.74
PrkdcP97313 Gm44539-201ENSMUST00000206010 238 ntBASIC4.19□□□□□ -1.74
PrkdcP97313 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC4.19□□□□□ -1.74
PrkdcP97313 Gm19174-201ENSMUST00000216944 956 ntBASIC4.19□□□□□ -1.74
PrkdcP97313 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
PrkdcP97313 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Ikbkap-201ENSMUST00000030140 6160 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PrkdcP97313 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PrkdcP97313 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PrkdcP97313 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms