Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.18□□□□□ -1.42
Sox3P53784 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC6.18□□□□□ -1.42
Sox3P53784 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sox3P53784 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.18□□□□□ -1.42
Sox3P53784 Gm45026-201ENSMUST00000205292 833 ntBASIC6.18□□□□□ -1.42
Sox3P53784 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.18□□□□□ -1.42
Sox3P53784 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC6.18□□□□□ -1.42
Sox3P53784 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.18□□□□□ -1.42
Sox3P53784 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.18□□□□□ -1.42
Sox3P53784 AC155941.1-201ENSMUST00000220223 529 ntBASIC6.18□□□□□ -1.42
Sox3P53784 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.18□□□□□ -1.42
Sox3P53784 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sox3P53784 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Sox3P53784 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Sox3P53784 Snora44-201ENSMUST00000082670 129 ntBASIC6.18□□□□□ -1.42
Sox3P53784 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.18□□□□□ -1.42
Sox3P53784 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sox3P53784 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sox3P53784 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sox3P53784 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sox3P53784 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.18□□□□□ -1.42
Sox3P53784 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Sox3P53784 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Sox3P53784 Gm18248-201ENSMUST00000191164 1846 ntBASIC6.18□□□□□ -1.42
Sox3P53784 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sox3P53784 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Sox3P53784 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sox3P53784 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox3P53784 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox3P53784 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox3P53784 AC153959.1-201ENSMUST00000213617 1694 ntBASIC6.17□□□□□ -1.42
Sox3P53784 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Sox3P53784 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox3P53784 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.17□□□□□ -1.42
Sox3P53784 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox3P53784 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox3P53784 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox3P53784 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC6.17□□□□□ -1.42
Sox3P53784 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sox3P53784 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox3P53784 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sox3P53784 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.17□□□□□ -1.42
Sox3P53784 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox3P53784 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox3P53784 Gm8582-201ENSMUST00000164061 789 ntBASIC6.17□□□□□ -1.42
Sox3P53784 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sox3P53784 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC6.17□□□□□ -1.42
Sox3P53784 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.17□□□□□ -1.42
Sox3P53784 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sox3P53784 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox3P53784 Gm21301-201ENSMUST00000189476 699 ntBASIC6.17□□□□□ -1.42
Sox3P53784 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.17□□□□□ -1.42
Sox3P53784 Gm37463-201ENSMUST00000193819 796 ntBASIC6.17□□□□□ -1.42
Sox3P53784 Gm8929-201ENSMUST00000197781 1132 ntBASIC6.17□□□□□ -1.42
Sox3P53784 Gm3321-201ENSMUST00000200603 1129 ntBASIC6.17□□□□□ -1.42
Sox3P53784 Gm44239-201ENSMUST00000204228 271 ntBASIC6.17□□□□□ -1.42
Sox3P53784 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox3P53784 Gm4510-201ENSMUST00000218265 427 ntBASIC6.17□□□□□ -1.42
Sox3P53784 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.17□□□□□ -1.42
Sox3P53784 AC127242.4-201ENSMUST00000221242 470 ntBASIC6.17□□□□□ -1.42
Sox3P53784 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.17□□□□□ -1.42
Sox3P53784 Olfr467-201ENSMUST00000084756 927 ntBASIC6.17□□□□□ -1.42
Sox3P53784 Gm10205-201ENSMUST00000087431 234 ntBASIC6.17□□□□□ -1.42
Sox3P53784 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Sox3P53784 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox3P53784 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox3P53784 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Sox3P53784 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox3P53784 AC158388.2-201ENSMUST00000223665 1314 ntBASIC6.17□□□□□ -1.42
Sox3P53784 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox3P53784 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox3P53784 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Sox3P53784 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sox3P53784 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Sox3P53784 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.16□□□□□ -1.42
Sox3P53784 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.16□□□□□ -1.42
Sox3P53784 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.16□□□□□ -1.42
Sox3P53784 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Sox3P53784 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Sox3P53784 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Sox3P53784 Gm25346-201ENSMUST00000104509 128 ntBASIC6.16□□□□□ -1.42
Sox3P53784 Gm22371-201ENSMUST00000104588 130 ntBASIC6.16□□□□□ -1.42
Sox3P53784 Gm15959-201ENSMUST00000121724 368 ntBASIC6.16□□□□□ -1.42
Sox3P53784 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Gm22210-201ENSMUST00000158101 144 ntBASIC6.16□□□□□ -1.42
Sox3P53784 Gm2959-201ENSMUST00000169844 621 ntBASIC6.16□□□□□ -1.42
Sox3P53784 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Gm7745-201ENSMUST00000182235 973 ntBASIC6.16□□□□□ -1.42
Sox3P53784 Mir7669-201ENSMUST00000183442 58 ntBASIC6.16□□□□□ -1.42
Sox3P53784 Mir6361-201ENSMUST00000185079 101 ntBASIC6.16□□□□□ -1.42
Sox3P53784 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Gm18700-201ENSMUST00000185791 553 ntBASIC6.16□□□□□ -1.42
Sox3P53784 Gm29519-201ENSMUST00000186994 398 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms