Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sox1P53783 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Sox1P53783 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sox1P53783 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sox1P53783 Txnip-202ENSMUST00000074519 2827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sox1P53783 Muc13-202ENSMUST00000115044 2969 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sox1P53783 Gm14729-201ENSMUST00000118373 689 ntBASIC7.41□□□□□ -1.22
Sox1P53783 Gm15785-201ENSMUST00000119145 694 ntBASIC7.41□□□□□ -1.22
Sox1P53783 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC7.41□□□□□ -1.22
Sox1P53783 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC7.41□□□□□ -1.22
Sox1P53783 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC7.41□□□□□ -1.22
Sox1P53783 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Sox1P53783 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC7.41□□□□□ -1.22
Sox1P53783 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Sox1P53783 Gm23030-201ENSMUST00000158004 273 ntBASIC7.41□□□□□ -1.22
Sox1P53783 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Sox1P53783 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Sox1P53783 Gm25037-201ENSMUST00000175418 110 ntBASIC7.41□□□□□ -1.22
Sox1P53783 Gm25690-201ENSMUST00000175439 77 ntBASIC7.41□□□□□ -1.22
Sox1P53783 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC7.41□□□□□ -1.22
Sox1P53783 Gm5473-201ENSMUST00000179326 642 ntBASIC7.41□□□□□ -1.22
Sox1P53783 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sox1P53783 Gm38181-201ENSMUST00000181357 720 ntBASIC7.41□□□□□ -1.22
Sox1P53783 Gm19200-201ENSMUST00000182579 1001 ntBASIC7.41□□□□□ -1.22
Sox1P53783 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC7.41□□□□□ -1.22
Sox1P53783 Gm8669-201ENSMUST00000183839 945 ntBASIC7.41□□□□□ -1.22
Sox1P53783 Scgb2b33-201ENSMUST00000187413 334 ntBASIC7.41□□□□□ -1.22
Sox1P53783 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC7.41□□□□□ -1.22
Sox1P53783 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC7.41□□□□□ -1.22
Sox1P53783 Gm43392-201ENSMUST00000196560 434 ntBASIC7.41□□□□□ -1.22
Sox1P53783 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC7.41□□□□□ -1.22
Sox1P53783 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC7.41□□□□□ -1.22
Sox1P53783 Gm6056-201ENSMUST00000221253 488 ntBASIC7.41□□□□□ -1.22
Sox1P53783 AC139568.1-201ENSMUST00000222878 486 ntBASIC7.41□□□□□ -1.22
Sox1P53783 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC7.41□□□□□ -1.22
Sox1P53783 AC154718.1-201ENSMUST00000226676 250 ntBASIC7.41□□□□□ -1.22
Sox1P53783 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Sox1P53783 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Sox1P53783 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
Sox1P53783 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
Sox1P53783 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
Sox1P53783 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
Sox1P53783 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sox1P53783 Gm17076-201ENSMUST00000165185 1401 ntBASIC7.41□□□□□ -1.22
Sox1P53783 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Sox1P53783 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Sox1P53783 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC7.41□□□□□ -1.22
Sox1P53783 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC7.41□□□□□ -1.22
Sox1P53783 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.41□□□□□ -1.22
Sox1P53783 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Sox1P53783 Gm37077-201ENSMUST00000195723 3691 ntBASIC7.41□□□□□ -1.22
Sox1P53783 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sox1P53783 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Sox1P53783 Olfr353-202ENSMUST00000215925 1615 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Sox1P53783 Gm43609-201ENSMUST00000199084 2712 ntBASIC7.41□□□□□ -1.22
Sox1P53783 Gm37151-201ENSMUST00000194631 5007 ntBASIC7.41□□□□□ -1.22
Sox1P53783 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Sox1P53783 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sox1P53783 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Sox1P53783 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Sox1P53783 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox1P53783 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox1P53783 Gm18422-202ENSMUST00000203798 2214 ntBASIC7.4□□□□□ -1.22
Sox1P53783 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Sox1P53783 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox1P53783 Gm38244-201ENSMUST00000191737 2586 ntBASIC7.4□□□□□ -1.22
Sox1P53783 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox1P53783 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC7.4□□□□□ -1.22
Sox1P53783 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC7.4□□□□□ -1.22
Sox1P53783 Gm43189-201ENSMUST00000196040 3069 ntBASIC7.4□□□□□ -1.22
Sox1P53783 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox1P53783 Kcnma1-206ENSMUST00000163322 3162 ntTSL 5 BASIC7.4□□□□□ -1.22
Sox1P53783 Kcnma1-210ENSMUST00000179836 3177 ntTSL 5 BASIC7.4□□□□□ -1.22
Sox1P53783 Gm14606-201ENSMUST00000117078 1155 ntBASIC7.4□□□□□ -1.22
Sox1P53783 Gm14788-201ENSMUST00000119457 375 ntBASIC7.4□□□□□ -1.22
Sox1P53783 Gm14837-201ENSMUST00000119688 206 ntBASIC7.4□□□□□ -1.22
Sox1P53783 Gm11359-201ENSMUST00000120039 567 ntBASIC7.4□□□□□ -1.22
Sox1P53783 Gm12773-201ENSMUST00000120134 587 ntBASIC7.4□□□□□ -1.22
Sox1P53783 Gm14898-201ENSMUST00000120202 645 ntBASIC7.4□□□□□ -1.22
Sox1P53783 Gm15116-201ENSMUST00000122248 663 ntBASIC7.4□□□□□ -1.22
Sox1P53783 Trav8-2-201ENSMUST00000130122 337 ntBASIC7.4□□□□□ -1.22
Sox1P53783 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.4□□□□□ -1.22
Sox1P53783 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox1P53783 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox1P53783 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC7.4□□□□□ -1.22
Sox1P53783 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox1P53783 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Sox1P53783 Gm37349-201ENSMUST00000194205 624 ntBASIC7.4□□□□□ -1.22
Sox1P53783 Gm43233-201ENSMUST00000200491 616 ntBASIC7.4□□□□□ -1.22
Sox1P53783 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC7.4□□□□□ -1.22
Sox1P53783 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC7.4□□□□□ -1.22
Sox1P53783 Gm2221-201ENSMUST00000209342 418 ntBASIC7.4□□□□□ -1.22
Sox1P53783 Gm8556-201ENSMUST00000210437 664 ntBASIC7.4□□□□□ -1.22
Sox1P53783 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC7.4□□□□□ -1.22
Sox1P53783 Gm5654-201ENSMUST00000217787 475 ntBASIC7.4□□□□□ -1.22
Sox1P53783 Gm3678-201ENSMUST00000218888 492 ntBASIC7.4□□□□□ -1.22
Sox1P53783 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC7.4□□□□□ -1.22
Sox1P53783 CT009733.1-202ENSMUST00000224941 441 ntBASIC7.4□□□□□ -1.22
Sox1P53783 AC187103.4-201ENSMUST00000225399 300 ntBASIC7.4□□□□□ -1.22
Sox1P53783 AC102603.1-201ENSMUST00000227481 584 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms