Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Traf1P39428 Gm14772-201ENSMUST00000116562 514 ntBASIC7.51□□□□□ -1.21
Traf1P39428 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC7.51□□□□□ -1.21
Traf1P39428 Gm12565-201ENSMUST00000119004 649 ntBASIC7.51□□□□□ -1.21
Traf1P39428 Gm6067-201ENSMUST00000121648 491 ntBASIC7.51□□□□□ -1.21
Traf1P39428 Gm14587-201ENSMUST00000121714 658 ntBASIC7.51□□□□□ -1.21
Traf1P39428 Gm15696-201ENSMUST00000121730 445 ntBASIC7.51□□□□□ -1.21
Traf1P39428 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC7.51□□□□□ -1.21
Traf1P39428 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC7.51□□□□□ -1.21
Traf1P39428 Gm22569-201ENSMUST00000175545 124 ntBASIC7.51□□□□□ -1.21
Traf1P39428 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Traf1P39428 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
Traf1P39428 Gm37135-201ENSMUST00000192652 534 ntBASIC7.51□□□□□ -1.21
Traf1P39428 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC7.51□□□□□ -1.21
Traf1P39428 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC7.51□□□□□ -1.21
Traf1P39428 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC7.51□□□□□ -1.21
Traf1P39428 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC7.51□□□□□ -1.21
Traf1P39428 Gm5055-201ENSMUST00000215697 581 ntBASIC7.51□□□□□ -1.21
Traf1P39428 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC7.51□□□□□ -1.21
Traf1P39428 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC7.51□□□□□ -1.21
Traf1P39428 Gm18591-201ENSMUST00000220568 763 ntBASIC7.51□□□□□ -1.21
Traf1P39428 AC073562.1-201ENSMUST00000222117 401 ntBASIC7.51□□□□□ -1.21
Traf1P39428 AC154757.2-201ENSMUST00000228885 743 ntBASIC7.51□□□□□ -1.21
Traf1P39428 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Traf1P39428 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Traf1P39428 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Traf1P39428 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Traf1P39428 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Traf1P39428 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC7.51□□□□□ -1.21
Traf1P39428 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Traf1P39428 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Traf1P39428 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Traf1P39428 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Traf1P39428 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Traf1P39428 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC7.51□□□□□ -1.21
Traf1P39428 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC7.5□□□□□ -1.21
Traf1P39428 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC7.5□□□□□ -1.21
Traf1P39428 Gm10826-201ENSMUST00000215366 3304 ntBASIC7.5□□□□□ -1.21
Traf1P39428 CT010577.1-202ENSMUST00000226187 1903 ntBASIC7.5□□□□□ -1.21
Traf1P39428 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC7.5□□□□□ -1.21
Traf1P39428 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC7.5□□□□□ -1.21
Traf1P39428 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Traf1P39428 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Traf1P39428 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Traf1P39428 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Traf1P39428 Gm42503-201ENSMUST00000199080 3706 ntBASIC7.5□□□□□ -1.21
Traf1P39428 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Traf1P39428 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Traf1P39428 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Traf1P39428 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Traf1P39428 Gm9836-201ENSMUST00000117132 216 ntBASIC7.5□□□□□ -1.21
Traf1P39428 Gm11972-201ENSMUST00000118514 389 ntBASIC7.5□□□□□ -1.21
Traf1P39428 Gm11879-201ENSMUST00000121885 702 ntBASIC7.5□□□□□ -1.21
Traf1P39428 Rps29-ps-201ENSMUST00000122083 172 ntBASIC7.5□□□□□ -1.21
Traf1P39428 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Traf1P39428 Gm27998-201ENSMUST00000184902 361 ntBASIC7.5□□□□□ -1.21
Traf1P39428 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC7.5□□□□□ -1.21
Traf1P39428 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
Traf1P39428 Gm20926-201ENSMUST00000194457 696 ntBASIC7.5□□□□□ -1.21
Traf1P39428 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC7.5□□□□□ -1.21
Traf1P39428 Gm43160-201ENSMUST00000196453 421 ntBASIC7.5□□□□□ -1.21
Traf1P39428 Gm44163-201ENSMUST00000205140 475 ntBASIC7.5□□□□□ -1.21
Traf1P39428 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC7.5□□□□□ -1.21
Traf1P39428 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC7.5□□□□□ -1.21
Traf1P39428 AC153557.1-201ENSMUST00000217697 403 ntBASIC7.5□□□□□ -1.21
Traf1P39428 AC147782.1-201ENSMUST00000219169 475 ntBASIC7.5□□□□□ -1.21
Traf1P39428 Gm19340-201ENSMUST00000221995 345 ntBASIC7.5□□□□□ -1.21
Traf1P39428 AC139568.1-201ENSMUST00000222878 486 ntBASIC7.5□□□□□ -1.21
Traf1P39428 AC154431.2-201ENSMUST00000225215 1055 ntBASIC7.5□□□□□ -1.21
Traf1P39428 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Traf1P39428 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Traf1P39428 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Traf1P39428 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Traf1P39428 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
Traf1P39428 CT009480.2-201ENSMUST00000225152 3369 ntBASIC7.5□□□□□ -1.21
Traf1P39428 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Traf1P39428 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Traf1P39428 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
Traf1P39428 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Traf1P39428 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Traf1P39428 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Traf1P39428 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Traf1P39428 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Traf1P39428 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Traf1P39428 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.49□□□□□ -1.21
Traf1P39428 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Traf1P39428 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Traf1P39428 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC7.49□□□□□ -1.21
Traf1P39428 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC7.49□□□□□ -1.21
Traf1P39428 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Traf1P39428 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Traf1P39428 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
Traf1P39428 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms