Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm43798-201ENSMUST00000202056 394 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm42646-201ENSMUST00000202233 914 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm4602-201ENSMUST00000203198 308 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm44112-201ENSMUST00000204787 372 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC5.07□□□□□ -1.6
Sdc1P18828 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC5.07□□□□□ -1.6
Sdc1P18828 Gm19196-201ENSMUST00000209258 357 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm18255-201ENSMUST00000211316 765 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Sdc1P18828 Hsd17b3-204ENSMUST00000222783 1184 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sdc1P18828 AC154573.2-201ENSMUST00000224174 378 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 AC122356.2-201ENSMUST00000226962 820 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sdc1P18828 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sdc1P18828 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sdc1P18828 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Sdc1P18828 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sdc1P18828 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Sdc1P18828 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Sdc1P18828 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Sdc1P18828 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sdc1P18828 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sdc1P18828 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sdc1P18828 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Sdc1P18828 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sdc1P18828 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.07□□□□□ -1.6
Sdc1P18828 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sdc1P18828 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sdc1P18828 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Sdc1P18828 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sdc1P18828 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sdc1P18828 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.07□□□□□ -1.6
Sdc1P18828 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
Sdc1P18828 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
Sdc1P18828 Gm11590-201ENSMUST00000118999 1455 ntBASIC5.07□□□□□ -1.6
Sdc1P18828 BC055308-201ENSMUST00000193380 2538 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sdc1P18828 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Sdc1P18828 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sdc1P18828 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sdc1P18828 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Sdc1P18828 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
Sdc1P18828 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sdc1P18828 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.06□□□□□ -1.6
Sdc1P18828 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sdc1P18828 AC139750.1-201ENSMUST00000223962 1300 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC5.06□□□□□ -1.6
Sdc1P18828 Gm26416-201ENSMUST00000104280 134 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Gm8916-201ENSMUST00000119732 949 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.06□□□□□ -1.6
Sdc1P18828 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC5.06□□□□□ -1.6
Sdc1P18828 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sdc1P18828 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sdc1P18828 Gm16260-201ENSMUST00000155141 304 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Gm26183-201ENSMUST00000157685 139 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Gm24363-201ENSMUST00000158440 311 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Gm24176-201ENSMUST00000158928 121 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC5.06□□□□□ -1.6
Sdc1P18828 Gm4202-201ENSMUST00000169025 733 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Gm26238-201ENSMUST00000175538 117 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC5.06□□□□□ -1.6
Sdc1P18828 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sdc1P18828 Gm27005-201ENSMUST00000182783 921 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC5.06□□□□□ -1.6
Sdc1P18828 Txn-ps1-201ENSMUST00000186385 309 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sdc1P18828 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Gm37380-201ENSMUST00000193752 397 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC5.06□□□□□ -1.6
Sdc1P18828 Gm38306-201ENSMUST00000193954 237 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Gm37838-201ENSMUST00000194464 312 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.06□□□□□ -1.6
Sdc1P18828 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.06□□□□□ -1.6
Sdc1P18828 Gm42965-201ENSMUST00000201254 250 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Gm45899-201ENSMUST00000212196 1276 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC5.06□□□□□ -1.6
Sdc1P18828 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sdc1P18828 Gm18292-201ENSMUST00000216673 919 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Gm3678-201ENSMUST00000218888 492 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC5.06□□□□□ -1.6
Sdc1P18828 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC5.06□□□□□ -1.6
Sdc1P18828 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Sdc1P18828 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sdc1P18828 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sdc1P18828 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Sdc1P18828 Mir196a-1-201ENSMUST00000083612 102 ntBASIC5.06□□□□□ -1.6
Sdc1P18828 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Sdc1P18828 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Sdc1P18828 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sdc1P18828 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.06□□□□□ -1.6
Sdc1P18828 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sdc1P18828 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sdc1P18828 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms