Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC6.37□□□□□ -1.39
Lire1P11260 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC6.37□□□□□ -1.39
Lire1P11260 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Lire1P11260 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Lire1P11260 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.37□□□□□ -1.39
Lire1P11260 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Lire1P11260 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Lire1P11260 Gm12813-201ENSMUST00000119615 902 ntBASIC6.37□□□□□ -1.39
Lire1P11260 Gm14202-201ENSMUST00000120121 311 ntBASIC6.37□□□□□ -1.39
Lire1P11260 Gm6142-201ENSMUST00000120290 325 ntBASIC6.37□□□□□ -1.39
Lire1P11260 Gm11343-201ENSMUST00000120579 599 ntBASIC6.37□□□□□ -1.39
Lire1P11260 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Lire1P11260 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.37□□□□□ -1.39
Lire1P11260 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Lire1P11260 Gm6428-201ENSMUST00000161062 345 ntBASIC6.37□□□□□ -1.39
Lire1P11260 Gm17511-201ENSMUST00000172206 342 ntBASIC6.37□□□□□ -1.39
Lire1P11260 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Lire1P11260 Gm28070-201ENSMUST00000191502 445 ntBASIC6.37□□□□□ -1.39
Lire1P11260 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC6.37□□□□□ -1.39
Lire1P11260 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Lire1P11260 Gm42782-201ENSMUST00000197286 522 ntBASIC6.37□□□□□ -1.39
Lire1P11260 Gm43157-201ENSMUST00000198223 412 ntBASIC6.37□□□□□ -1.39
Lire1P11260 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC6.37□□□□□ -1.39
Lire1P11260 Gm44971-201ENSMUST00000206192 337 ntBASIC6.37□□□□□ -1.39
Lire1P11260 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.37□□□□□ -1.39
Lire1P11260 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC6.37□□□□□ -1.39
Lire1P11260 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.37□□□□□ -1.39
Lire1P11260 AC155709.1-201ENSMUST00000218794 162 ntBASIC6.37□□□□□ -1.39
Lire1P11260 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Lire1P11260 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
Lire1P11260 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Lire1P11260 Gm22053-201ENSMUST00000083394 200 ntBASIC6.37□□□□□ -1.39
Lire1P11260 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
Lire1P11260 Gm5446-201ENSMUST00000091762 784 ntBASIC6.37□□□□□ -1.39
Lire1P11260 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Lire1P11260 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Lire1P11260 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Lire1P11260 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.37□□□□□ -1.39
Lire1P11260 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Lire1P11260 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Lire1P11260 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Lire1P11260 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Lire1P11260 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Lire1P11260 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Lire1P11260 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC6.37□□□□□ -1.39
Lire1P11260 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Lire1P11260 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Lire1P11260 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Lire1P11260 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Lire1P11260 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.36□□□□□ -1.39
Lire1P11260 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lire1P11260 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Lire1P11260 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Lire1P11260 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.36□□□□□ -1.39
Lire1P11260 Rnu11-201ENSMUST00000104135 134 ntBASIC6.36□□□□□ -1.39
Lire1P11260 Gm12939-201ENSMUST00000117303 165 ntBASIC6.36□□□□□ -1.39
Lire1P11260 Gm10241-201ENSMUST00000117664 286 ntBASIC6.36□□□□□ -1.39
Lire1P11260 Gm14863-201ENSMUST00000119648 307 ntBASIC6.36□□□□□ -1.39
Lire1P11260 Gm11338-201ENSMUST00000120086 1160 ntBASIC6.36□□□□□ -1.39
Lire1P11260 Gm12654-201ENSMUST00000120387 587 ntBASIC6.36□□□□□ -1.39
Lire1P11260 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.36□□□□□ -1.39
Lire1P11260 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Lire1P11260 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.36□□□□□ -1.39
Lire1P11260 Mir1930-201ENSMUST00000158799 84 ntBASIC6.36□□□□□ -1.39
Lire1P11260 Gm17907-201ENSMUST00000173150 710 ntBASIC6.36□□□□□ -1.39
Lire1P11260 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC6.36□□□□□ -1.39
Lire1P11260 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Lire1P11260 Gm27014-201ENSMUST00000182658 937 ntBASIC6.36□□□□□ -1.39
Lire1P11260 Gm26993-201ENSMUST00000182766 789 ntBASIC6.36□□□□□ -1.39
Lire1P11260 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC6.36□□□□□ -1.39
Lire1P11260 Mir378d-201ENSMUST00000184232 110 ntBASIC6.36□□□□□ -1.39
Lire1P11260 Mir7033-201ENSMUST00000184259 81 ntBASIC6.36□□□□□ -1.39
Lire1P11260 Gm5058-201ENSMUST00000187331 463 ntBASIC6.36□□□□□ -1.39
Lire1P11260 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Lire1P11260 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Lire1P11260 Gm9710-201ENSMUST00000198053 499 ntBASIC6.36□□□□□ -1.39
Lire1P11260 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Lire1P11260 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.36□□□□□ -1.39
Lire1P11260 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Lire1P11260 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC6.36□□□□□ -1.39
Lire1P11260 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6.36□□□□□ -1.39
Lire1P11260 Gm44856-201ENSMUST00000206639 304 ntBASIC6.36□□□□□ -1.39
Lire1P11260 Gm44566-201ENSMUST00000207638 304 ntBASIC6.36□□□□□ -1.39
Lire1P11260 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Lire1P11260 Gm45782-201ENSMUST00000212670 366 ntBASIC6.36□□□□□ -1.39
Lire1P11260 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC6.36□□□□□ -1.39
Lire1P11260 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC6.36□□□□□ -1.39
Lire1P11260 AC125117.2-201ENSMUST00000228344 1140 ntBASIC6.36□□□□□ -1.39
Lire1P11260 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Lire1P11260 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Lire1P11260 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC6.36□□□□□ -1.39
Lire1P11260 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.36□□□□□ -1.39
Lire1P11260 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.36□□□□□ -1.39
Lire1P11260 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC6.36□□□□□ -1.39
Lire1P11260 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lire1P11260 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lire1P11260 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Lire1P11260 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lire1P11260 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Lire1P11260 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms