Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Hoxd3P09027 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxd3P09027 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxd3P09027 Gm44986-201ENSMUST00000206292 2829 ntBASIC6.32□□□□□ -1.4
Hoxd3P09027 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC6.32□□□□□ -1.4
Hoxd3P09027 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Hoxd3P09027 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Hoxd3P09027 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxd3P09027 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxd3P09027 Gm16434-201ENSMUST00000100888 2066 ntAPPRIS P5 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxd3P09027 Gm6676-201ENSMUST00000166493 2066 ntAPPRIS P5 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxd3P09027 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hoxd3P09027 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.32□□□□□ -1.4
Hoxd3P09027 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Hoxd3P09027 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 AC160115.1-201ENSMUST00000224678 1574 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Dtna-201ENSMUST00000047954 1596 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm18954-201ENSMUST00000222200 1792 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Hoxd3P09027 Arsg-203ENSMUST00000106697 3232 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Hoxd3P09027 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Hoxd3P09027 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
Hoxd3P09027 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC6.31□□□□□ -1.4
Hoxd3P09027 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Zfp82-207ENSMUST00000183190 1906 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Trpa1-201ENSMUST00000041447 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 AC156025.3-201ENSMUST00000225919 3095 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Ap1s3-203ENSMUST00000162342 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 CT573019.1-201ENSMUST00000227762 1689 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Mir804-201ENSMUST00000103251 95 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm25785-201ENSMUST00000104129 125 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm13573-201ENSMUST00000116410 631 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm25316-201ENSMUST00000116826 118 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm7485-201ENSMUST00000119502 1109 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm14131-201ENSMUST00000119636 719 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm12773-201ENSMUST00000120134 587 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm15842-201ENSMUST00000120513 618 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm6292-201ENSMUST00000120712 1095 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm5270-201ENSMUST00000121506 1002 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm13237-201ENSMUST00000122151 635 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm25320-201ENSMUST00000122551 324 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm7855-201ENSMUST00000137737 687 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC6.31□□□□□ -1.4
Hoxd3P09027 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC6.31□□□□□ -1.4
Hoxd3P09027 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm24236-201ENSMUST00000157794 134 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 U2af1l4-205ENSMUST00000163482 668 ntTSL 5 BASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm4246-201ENSMUST00000172822 216 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm8974-201ENSMUST00000175770 479 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm23619-201ENSMUST00000178411 94 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm25474-201ENSMUST00000179052 94 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm22047-201ENSMUST00000179176 94 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm26570-201ENSMUST00000180672 342 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Calm5-201ENSMUST00000183198 589 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Hoxd3P09027 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Hoxd3P09027 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm33354-201ENSMUST00000195448 906 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm42977-201ENSMUST00000197497 144 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC6.31□□□□□ -1.4
Hoxd3P09027 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm19092-201ENSMUST00000209036 969 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Rpl32l-201ENSMUST00000216127 399 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm19441-201ENSMUST00000221545 330 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 AC122465.3-201ENSMUST00000221644 355 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC6.31□□□□□ -1.4
Hoxd3P09027 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 AC147096.1-201ENSMUST00000227648 352 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm12582-201ENSMUST00000030555 697 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Hoxd3P09027 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Hoxd3P09027 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxd3P09027 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Hoxd3P09027 n-R5s94-201ENSMUST00000082573 119 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Gm25793-201ENSMUST00000083287 107 ntBASIC6.31□□□□□ -1.4
Hoxd3P09027 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms