Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Pcdh1F7BJK1 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.35□□□□□ -1.39
Pcdh1F7BJK1 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.35□□□□□ -1.39
Pcdh1F7BJK1 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Pcdh1F7BJK1 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.35□□□□□ -1.39
Pcdh1F7BJK1 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm44739-201ENSMUST00000205294 1426 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm42668-201ENSMUST00000200747 2487 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm12727-201ENSMUST00000119885 359 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm15481-201ENSMUST00000120264 539 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm11896-201ENSMUST00000121105 820 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm14053-201ENSMUST00000121662 470 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm22882-201ENSMUST00000157749 124 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Rab26os-201ENSMUST00000176215 477 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm28117-201ENSMUST00000188472 371 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm29525-201ENSMUST00000189844 699 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm29523-201ENSMUST00000191415 699 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm6123-201ENSMUST00000193658 1069 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm18131-201ENSMUST00000199241 449 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm7151-201ENSMUST00000211511 954 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm8616-201ENSMUST00000222175 1037 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 CT009556.3-201ENSMUST00000226173 513 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 CT009556.4-201ENSMUST00000227092 200 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm7493-201ENSMUST00000085919 626 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.34□□□□□ -1.39
Pcdh1F7BJK1 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Pcdh1F7BJK1 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
Pcdh1F7BJK1 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm37163-201ENSMUST00000195439 1690 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm23529-201ENSMUST00000104562 132 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm14621-201ENSMUST00000117709 689 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm14945-201ENSMUST00000119556 1118 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm13902-201ENSMUST00000120168 605 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm15049-201ENSMUST00000120474 463 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm13121-201ENSMUST00000120637 632 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm24139-201ENSMUST00000122780 288 ntBASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Pcdh1F7BJK1 Gm26323-201ENSMUST00000157743 175 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms