Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm42940-201ENSMUST00000200361 2362 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm15073-201ENSMUST00000117432 634 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm14870-201ENSMUST00000118414 156 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm11804-201ENSMUST00000121663 468 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm6808-201ENSMUST00000162341 807 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm9597-201ENSMUST00000171913 602 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm26923-201ENSMUST00000182615 996 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm37024-201ENSMUST00000192224 868 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Gm232-201ENSMUST00000216549 2559 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Col6a4A2AX52 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a4A2AX52 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.36□□□□□ -1.55
Col6a4A2AX52 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a4A2AX52 Gm38366-201ENSMUST00000193127 1934 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a4A2AX52 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Col6a4A2AX52 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col6a4A2AX52 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a4A2AX52 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a4A2AX52 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a4A2AX52 Gm43398-201ENSMUST00000196584 2742 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Gm14335-201ENSMUST00000119165 810 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Gm13626-201ENSMUST00000119435 402 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Gm23757-201ENSMUST00000158353 100 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Gm25906-201ENSMUST00000158489 126 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Mir3062-201ENSMUST00000174986 105 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC5.35□□□□□ -1.55
Col6a4A2AX52 Gm44768-201ENSMUST00000205719 393 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.35□□□□□ -1.55
Col6a4A2AX52 Mir143-201ENSMUST00000083511 63 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Col6a4A2AX52 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a4A2AX52 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a4A2AX52 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a4A2AX52 Gm45250-201ENSMUST00000209414 3592 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Col6a4A2AX52 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a4A2AX52 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a4A2AX52 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.35□□□□□ -1.55
Col6a4A2AX52 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a4A2AX52 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Col6a4A2AX52 Gm24989-201ENSMUST00000104461 88 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Gm8761-201ENSMUST00000121507 955 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Gm23740-201ENSMUST00000157385 100 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Gm3053-201ENSMUST00000161709 616 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Mir6367-201ENSMUST00000183385 102 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
Col6a4A2AX52 Gm29813-201ENSMUST00000195856 447 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Gm44919-201ENSMUST00000208587 1073 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Vmn1r41-202ENSMUST00000226337 888 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Col6a4A2AX52 Gm37924-201ENSMUST00000195470 3647 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC5.35□□□□□ -1.55
Col6a4A2AX52 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a4A2AX52 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a4A2AX52 AC163660.4-201ENSMUST00000224983 2171 ntBASIC5.35□□□□□ -1.55
Col6a4A2AX52 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a4A2AX52 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a4A2AX52 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Col6a4A2AX52 Gm8276-201ENSMUST00000192231 1812 ntBASIC5.34□□□□□ -1.55
Col6a4A2AX52 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a4A2AX52 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a4A2AX52 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a4A2AX52 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a4A2AX52 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a4A2AX52 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.34□□□□□ -1.55
Col6a4A2AX52 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a4A2AX52 Gm43707-201ENSMUST00000196451 3187 ntBASIC5.34□□□□□ -1.55
Col6a4A2AX52 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Col6a4A2AX52 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC5.34□□□□□ -1.55
Col6a4A2AX52 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a4A2AX52 Gm12442-201ENSMUST00000118372 338 ntBASIC5.34□□□□□ -1.55
Col6a4A2AX52 Gm13533-201ENSMUST00000121104 177 ntBASIC5.34□□□□□ -1.55
Col6a4A2AX52 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col6a4A2AX52 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms