Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Scn1aA2APX8 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Scn1aA2APX8 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6.57□□□□□ -1.36
Scn1aA2APX8 Gm24733-201ENSMUST00000158863 253 ntBASIC6.57□□□□□ -1.36
Scn1aA2APX8 Gm18199-201ENSMUST00000173820 835 ntBASIC6.57□□□□□ -1.36
Scn1aA2APX8 Gm18191-201ENSMUST00000174624 824 ntBASIC6.57□□□□□ -1.36
Scn1aA2APX8 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.57□□□□□ -1.36
Scn1aA2APX8 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Scn1aA2APX8 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.57□□□□□ -1.36
Scn1aA2APX8 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.57□□□□□ -1.36
Scn1aA2APX8 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Scn1aA2APX8 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.57□□□□□ -1.36
Scn1aA2APX8 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Scn1aA2APX8 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.57□□□□□ -1.36
Scn1aA2APX8 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scn1aA2APX8 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Scn1aA2APX8 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Scn1aA2APX8 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scn1aA2APX8 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scn1aA2APX8 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scn1aA2APX8 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scn1aA2APX8 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Scn1aA2APX8 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scn1aA2APX8 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scn1aA2APX8 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.56□□□□□ -1.36
Scn1aA2APX8 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Scn1aA2APX8 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.56□□□□□ -1.36
Scn1aA2APX8 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn1aA2APX8 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.56□□□□□ -1.36
Scn1aA2APX8 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Gm14805-201ENSMUST00000120172 340 ntBASIC6.56□□□□□ -1.36
Scn1aA2APX8 Gm6446-201ENSMUST00000120604 818 ntBASIC6.56□□□□□ -1.36
Scn1aA2APX8 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Gm25387-201ENSMUST00000157813 132 ntBASIC6.56□□□□□ -1.36
Scn1aA2APX8 Gm6541-201ENSMUST00000165542 561 ntBASIC6.56□□□□□ -1.36
Scn1aA2APX8 Mir6361-201ENSMUST00000185079 101 ntBASIC6.56□□□□□ -1.36
Scn1aA2APX8 Gm6631-201ENSMUST00000193699 559 ntBASIC6.56□□□□□ -1.36
Scn1aA2APX8 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Scn1aA2APX8 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC6.56□□□□□ -1.36
Scn1aA2APX8 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.56□□□□□ -1.36
Scn1aA2APX8 AC102139.1-201ENSMUST00000227000 251 ntBASIC6.56□□□□□ -1.36
Scn1aA2APX8 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Scn1aA2APX8 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.56□□□□□ -1.36
Scn1aA2APX8 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.56□□□□□ -1.36
Scn1aA2APX8 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.56□□□□□ -1.36
Scn1aA2APX8 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Scn1aA2APX8 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Gm18878-201ENSMUST00000223071 1443 ntBASIC6.56□□□□□ -1.36
Scn1aA2APX8 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn1aA2APX8 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scn1aA2APX8 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Scn1aA2APX8 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Scn1aA2APX8 Gm12307-201ENSMUST00000120581 590 ntBASIC6.55□□□□□ -1.36
Scn1aA2APX8 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Scn1aA2APX8 Mir6992-201ENSMUST00000183342 109 ntBASIC6.55□□□□□ -1.36
Scn1aA2APX8 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC6.55□□□□□ -1.36
Scn1aA2APX8 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Scn1aA2APX8 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.55□□□□□ -1.36
Scn1aA2APX8 Gm43222-201ENSMUST00000199013 603 ntBASIC6.55□□□□□ -1.36
Scn1aA2APX8 Gm30708-201ENSMUST00000202183 312 ntBASIC6.55□□□□□ -1.36
Scn1aA2APX8 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Scn1aA2APX8 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC6.55□□□□□ -1.36
Scn1aA2APX8 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC6.55□□□□□ -1.36
Scn1aA2APX8 Gm18632-201ENSMUST00000222597 2087 ntBASIC6.55□□□□□ -1.36
Scn1aA2APX8 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scn1aA2APX8 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.55□□□□□ -1.36
Scn1aA2APX8 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.55□□□□□ -1.36
Scn1aA2APX8 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.55□□□□□ -1.36
Scn1aA2APX8 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
Scn1aA2APX8 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Scn1aA2APX8 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC6.55□□□□□ -1.36
Scn1aA2APX8 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Scn1aA2APX8 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scn1aA2APX8 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scn1aA2APX8 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms