Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H2afb2S4R1M3 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm23768-201ENSMUST00000104440 131 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm14116-201ENSMUST00000117733 805 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm11925-201ENSMUST00000121375 535 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm14212-201ENSMUST00000122023 826 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm11962-201ENSMUST00000145746 255 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm25374-201ENSMUST00000158158 101 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm9556-201ENSMUST00000182938 940 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm7626-201ENSMUST00000195801 353 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Ighv1-73-201ENSMUST00000197435 352 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm7554-201ENSMUST00000202282 574 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm44279-201ENSMUST00000205154 472 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 AC079644.2-201ENSMUST00000220581 322 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 AV026068-218ENSMUST00000223980 575 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.29□□□□□ -1.4
H2afb2S4R1M3 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb2S4R1M3 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Gm13626-201ENSMUST00000119435 402 ntBASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Gm14716-201ENSMUST00000120138 718 ntBASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Gm13338-201ENSMUST00000120235 361 ntBASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Gm12094-201ENSMUST00000121781 472 ntBASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Gm25989-201ENSMUST00000158761 133 ntBASIC6.28□□□□□ -1.4
H2afb2S4R1M3 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms