Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm11799-201ENSMUST00000116110 460 ntBASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm15016-201ENSMUST00000117300 720 ntBASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm12565-201ENSMUST00000119004 649 ntBASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm14716-201ENSMUST00000120138 718 ntBASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm7494-201ENSMUST00000121248 441 ntBASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm5834-201ENSMUST00000126680 1026 ntBASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm25374-201ENSMUST00000158158 101 ntBASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm27853-201ENSMUST00000184176 250 ntBASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm37770-201ENSMUST00000192855 772 ntBASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm7554-201ENSMUST00000202282 574 ntBASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm18600-201ENSMUST00000207205 505 ntBASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm9535-201ENSMUST00000218499 768 ntBASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm18628-201ENSMUST00000220584 475 ntBASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 AC137950.3-201ENSMUST00000228250 246 ntBASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm15732-201ENSMUST00000079794 480 ntBASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.43□□□□□ -1.38
Cldn3Q9Z0G9 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Gm22710-201ENSMUST00000116892 125 ntBASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Gm14755-201ENSMUST00000118037 384 ntBASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Gm11833-201ENSMUST00000118393 853 ntBASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Gm23343-201ENSMUST00000158964 143 ntBASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 CT009527.2-201ENSMUST00000225386 606 ntBASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Gm15500-201ENSMUST00000071523 894 ntBASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cldn3Q9Z0G9 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cldn3Q9Z0G9 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms