Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Gm12930-201ENSMUST00000146679 676 ntTSL 3 BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Scarna17-201ENSMUST00000158064 79 ntBASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Gm26355-201ENSMUST00000158220 105 ntBASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Gm6100-201ENSMUST00000180253 403 ntBASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Gm38097-201ENSMUST00000192936 439 ntBASIC7.42□□□□□ -1.22
Trim42Q9D2H5 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Gm43476-201ENSMUST00000197873 405 ntBASIC7.42□□□□□ -1.22
Trim42Q9D2H5 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC7.42□□□□□ -1.22
Trim42Q9D2H5 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 1700021F13Rik-202ENSMUST00000202665 469 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Gm38840-201ENSMUST00000204716 843 ntBASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Gm45432-201ENSMUST00000210391 416 ntBASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Gm7986-201ENSMUST00000221336 551 ntBASIC7.42□□□□□ -1.22
Trim42Q9D2H5 AC163041.2-201ENSMUST00000223082 573 ntBASIC7.42□□□□□ -1.22
Trim42Q9D2H5 CT025525.3-201ENSMUST00000228858 366 ntBASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Mir486-201ENSMUST00000093576 128 ntBASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Gm37278-201ENSMUST00000191619 2872 ntBASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Gm44584-201ENSMUST00000208395 2880 ntBASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Gm14762-202ENSMUST00000122953 1430 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Gm44677-201ENSMUST00000209151 3739 ntBASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
Trim42Q9D2H5 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm26012-201ENSMUST00000104411 128 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm12392-201ENSMUST00000118014 938 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm22262-201ENSMUST00000158713 86 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 A530032D15Rik-203ENSMUST00000161724 789 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm16494-201ENSMUST00000165525 261 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm27905-201ENSMUST00000184005 207 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm20587-201ENSMUST00000186367 1186 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm17867-201ENSMUST00000188981 391 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm18699-201ENSMUST00000190713 243 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm44471-201ENSMUST00000197963 100 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm44203-201ENSMUST00000203134 307 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm19182-201ENSMUST00000207139 577 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm45299-201ENSMUST00000210199 420 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 AC132121.1-201ENSMUST00000220774 332 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm46317-201ENSMUST00000221103 393 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm18388-201ENSMUST00000222339 557 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 AL591207.2-201ENSMUST00000222991 337 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 1700066J03Rik-202ENSMUST00000224280 516 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 CT010480.3-201ENSMUST00000224712 259 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 AC122774.1-201ENSMUST00000227703 762 ntBASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Gm21541-201ENSMUST00000098128 870 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Trim42Q9D2H5 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms