Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Gm14900-201ENSMUST00000120304 733 ntBASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Gm13259-201ENSMUST00000120792 456 ntBASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Gm25439-201ENSMUST00000158280 131 ntBASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Gm9671-201ENSMUST00000171502 547 ntBASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Gm29284-201ENSMUST00000188363 255 ntBASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Gm18752-201ENSMUST00000192876 608 ntBASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Gm36448-201ENSMUST00000199916 438 ntBASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Gm42653-201ENSMUST00000200644 2839 ntBASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh23Q99PF4 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Gm13930-201ENSMUST00000118569 368 ntBASIC6.19□□□□□ -1.42
Cdh23Q99PF4 n-R5s24-201ENSMUST00000122518 117 ntBASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Gm7609-204ENSMUST00000161424 461 ntBASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Gm2614-201ENSMUST00000223227 403 ntBASIC6.19□□□□□ -1.42
Cdh23Q99PF4 CT030705.1-201ENSMUST00000223971 533 ntBASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Gm9386-201ENSMUST00000095195 381 ntBASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Gm13679-201ENSMUST00000118678 484 ntBASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Gm29160-201ENSMUST00000190094 699 ntBASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Gm37758-201ENSMUST00000194275 629 ntBASIC6.19□□□□□ -1.42
Cdh23Q99PF4 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Zfp429-203ENSMUST00000224684 524 ntBASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Rai14-201ENSMUST00000090339 4909 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Ank3-206ENSMUST00000092434 5886 ntAPPRIS P4 TSL 5 BASIC6.19□□□□□ -1.42
Cdh23Q99PF4 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cdh23Q99PF4 Gm12444-201ENSMUST00000121512 877 ntBASIC6.18□□□□□ -1.42
Cdh23Q99PF4 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC6.18□□□□□ -1.42
Cdh23Q99PF4 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC6.18□□□□□ -1.42
Cdh23Q99PF4 Gm28385-201ENSMUST00000185671 292 ntBASIC6.18□□□□□ -1.42
Cdh23Q99PF4 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdh23Q99PF4 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Cdh23Q99PF4 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdh23Q99PF4 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdh23Q99PF4 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cdh23Q99PF4 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdh23Q99PF4 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdh23Q99PF4 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.18□□□□□ -1.42
Cdh23Q99PF4 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Cdh23Q99PF4 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
Cdh23Q99PF4 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms