Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cstf1Q99LC2 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cstf1Q99LC2 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.52□□□□□ -1.37
Cstf1Q99LC2 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.52□□□□□ -1.37
Cstf1Q99LC2 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cstf1Q99LC2 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cstf1Q99LC2 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cstf1Q99LC2 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cstf1Q99LC2 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cstf1Q99LC2 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cstf1Q99LC2 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
Cstf1Q99LC2 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Cstf1Q99LC2 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cstf1Q99LC2 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Cstf1Q99LC2 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Gm44121-201ENSMUST00000205169 2006 ntBASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Gm12447-201ENSMUST00000119110 470 ntBASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Gm12754-201ENSMUST00000121908 454 ntBASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Gm5970-201ENSMUST00000131638 1216 ntBASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Gm23250-201ENSMUST00000157444 267 ntBASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Mir7669-201ENSMUST00000183442 58 ntBASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Gm37203-201ENSMUST00000191618 385 ntBASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Gm37689-201ENSMUST00000193139 275 ntBASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Gm5853-201ENSMUST00000197183 632 ntBASIC6.51□□□□□ -1.37
Cstf1Q99LC2 BC049739-201ENSMUST00000202626 660 ntBASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Gm45750-201ENSMUST00000211966 354 ntBASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Gm7570-201ENSMUST00000215246 698 ntBASIC6.51□□□□□ -1.37
Cstf1Q99LC2 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Gm9293-201ENSMUST00000223096 306 ntBASIC6.51□□□□□ -1.37
Cstf1Q99LC2 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 AC159308.1-201ENSMUST00000216615 1351 ntBASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
Cstf1Q99LC2 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Gm13428-201ENSMUST00000117540 365 ntBASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Gm11976-201ENSMUST00000119236 295 ntBASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Gm11848-201ENSMUST00000121207 973 ntBASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Mir6348-201ENSMUST00000183804 120 ntBASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Gm27972-201ENSMUST00000184720 137 ntBASIC6.5□□□□□ -1.37
Cstf1Q99LC2 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.5□□□□□ -1.37
Cstf1Q99LC2 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Gm18914-201ENSMUST00000214625 616 ntBASIC6.5□□□□□ -1.37
Cstf1Q99LC2 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Gm8256-203ENSMUST00000228692 591 ntBASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf1Q99LC2 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 125.6 ms