Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Gm12654-201ENSMUST00000120387 587 ntBASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Gm11925-201ENSMUST00000121375 535 ntBASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Gm37620-201ENSMUST00000192910 501 ntBASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Igkv4-77-201ENSMUST00000199410 352 ntBASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Gm9367-201ENSMUST00000205703 546 ntBASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Gm18040-201ENSMUST00000217922 827 ntBASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Gm2398-201ENSMUST00000218347 883 ntBASIC6.13□□□□□ -1.43
Lsm1Q8VC85 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.13□□□□□ -1.43
Lsm1Q8VC85 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.13□□□□□ -1.43
Lsm1Q8VC85 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.12□□□□□ -1.43
Lsm1Q8VC85 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.12□□□□□ -1.43
Lsm1Q8VC85 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Rnu11-201ENSMUST00000104135 134 ntBASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm15586-201ENSMUST00000121218 528 ntBASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm24422-201ENSMUST00000157800 119 ntBASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm6918-201ENSMUST00000167622 1222 ntBASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm23968-201ENSMUST00000175047 125 ntBASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm38328-201ENSMUST00000195582 317 ntBASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm5853-201ENSMUST00000197183 632 ntBASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm44243-201ENSMUST00000204323 692 ntBASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm4548-201ENSMUST00000208487 509 ntBASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm2754-201ENSMUST00000223383 589 ntBASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm5321-201ENSMUST00000072050 447 ntBASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Gm6436-201ENSMUST00000077163 451 ntBASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Lsm1Q8VC85 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms