Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Gm14732-201ENSMUST00000121372 545 ntBASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Gm11545-201ENSMUST00000146507 375 ntBASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Gm17223-201ENSMUST00000171413 481 ntBASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Gm6726-201ENSMUST00000172786 681 ntBASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Mir8094-201ENSMUST00000183361 117 ntBASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Gm28573-201ENSMUST00000187821 380 ntBASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Gm28883-201ENSMUST00000189256 369 ntBASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Gm28400-201ENSMUST00000191332 380 ntBASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Gm44319-201ENSMUST00000196974 93 ntBASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Klra13-ps-203ENSMUST00000204367 850 ntBASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Gm43905-201ENSMUST00000204516 204 ntBASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 AC114573.1-201ENSMUST00000224120 1210 ntBASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 AC154738.7-201ENSMUST00000228606 579 ntBASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 AC156016.5-201ENSMUST00000228742 355 ntBASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Gm37930-201ENSMUST00000194308 1886 ntBASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc9Q8VC31 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Gm26079-201ENSMUST00000104066 133 ntBASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Gm11212-201ENSMUST00000118337 618 ntBASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Gm14480-201ENSMUST00000118521 433 ntBASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Gm13038-201ENSMUST00000119886 459 ntBASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Gm13899-201ENSMUST00000121519 1255 ntBASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Gm22882-201ENSMUST00000157749 124 ntBASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Gm23964-201ENSMUST00000157966 107 ntBASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Gm22206-201ENSMUST00000158612 116 ntBASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Gm28745-201ENSMUST00000190069 305 ntBASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Gm3103-201ENSMUST00000198073 752 ntBASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Gm42428-201ENSMUST00000198677 302 ntBASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Gm44760-201ENSMUST00000206375 1173 ntBASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Gm45413-201ENSMUST00000210389 3538 ntBASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 AC153954.2-201ENSMUST00000213811 287 ntBASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Gm6054-201ENSMUST00000078052 378 ntBASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Gm20900-201ENSMUST00000078729 472 ntBASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Mir3068-201ENSMUST00000083004 136 ntBASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc9Q8VC31 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC7.65□□□□□ -1.19
Ccdc9Q8VC31 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ccdc9Q8VC31 Gm44440-201ENSMUST00000203139 2373 ntBASIC7.64□□□□□ -1.19
Ccdc9Q8VC31 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc9Q8VC31 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc9Q8VC31 Gm45426-201ENSMUST00000209393 3672 ntBASIC7.64□□□□□ -1.19
Ccdc9Q8VC31 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Ccdc9Q8VC31 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc9Q8VC31 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Ccdc9Q8VC31 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Ccdc9Q8VC31 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC7.64□□□□□ -1.19
Ccdc9Q8VC31 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Ccdc9Q8VC31 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC7.64□□□□□ -1.19
Ccdc9Q8VC31 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc9Q8VC31 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc9Q8VC31 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC7.64□□□□□ -1.19
Ccdc9Q8VC31 Gm14248-201ENSMUST00000117790 544 ntBASIC7.64□□□□□ -1.19
Ccdc9Q8VC31 Gm11320-201ENSMUST00000119434 463 ntBASIC7.64□□□□□ -1.19
Ccdc9Q8VC31 Gm13525-201ENSMUST00000120607 478 ntBASIC7.64□□□□□ -1.19
Ccdc9Q8VC31 Gm14787-201ENSMUST00000121236 388 ntBASIC7.64□□□□□ -1.19
Ccdc9Q8VC31 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
Ccdc9Q8VC31 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC7.64□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms