Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm37621-201ENSMUST00000194716 5531 ntBASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Vps53Q8CCB4 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm46199-201ENSMUST00000220373 1693 ntBASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm38277-201ENSMUST00000195172 1367 ntBASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm37216-201ENSMUST00000193817 3478 ntBASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Mir674-201ENSMUST00000102421 100 ntBASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm11318-201ENSMUST00000118640 961 ntBASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm11198-201ENSMUST00000119771 974 ntBASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm12101-201ENSMUST00000121590 390 ntBASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm28996-201ENSMUST00000190316 721 ntBASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm38237-201ENSMUST00000193366 376 ntBASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Ighv10-4-201ENSMUST00000193702 299 ntBASIC7.6□□□□□ -1.19
Vps53Q8CCB4 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm42443-201ENSMUST00000198084 1155 ntBASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm44571-201ENSMUST00000208092 533 ntBASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm30694-201ENSMUST00000209278 1230 ntBASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm45485-201ENSMUST00000211229 357 ntBASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 AC153522.1-201ENSMUST00000220047 1090 ntBASIC7.6□□□□□ -1.19
Vps53Q8CCB4 AC172989.1-201ENSMUST00000226387 513 ntBASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm25133-201ENSMUST00000082647 130 ntBASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm24405-201ENSMUST00000083033 167 ntBASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Gm38322-201ENSMUST00000194074 2300 ntBASIC7.6□□□□□ -1.19
Vps53Q8CCB4 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 AC154406.1-201ENSMUST00000215220 2529 ntBASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Gm11271-201ENSMUST00000116054 440 ntBASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Gm15048-201ENSMUST00000118201 954 ntBASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Sms-ps-201ENSMUST00000121773 1101 ntBASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Gm12152-201ENSMUST00000122465 684 ntBASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Gm23810-201ENSMUST00000175150 74 ntBASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Gm27299-201ENSMUST00000184593 103 ntBASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Gm28885-201ENSMUST00000185615 563 ntBASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Gm28186-201ENSMUST00000187447 679 ntBASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Gm28443-201ENSMUST00000189081 698 ntBASIC7.59□□□□□ -1.19
Vps53Q8CCB4 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Gm35323-201ENSMUST00000191836 499 ntBASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Gm37901-201ENSMUST00000195107 514 ntBASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Gm29784-201ENSMUST00000196217 406 ntBASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Gm8190-201ENSMUST00000199603 586 ntBASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Gm18377-201ENSMUST00000215141 607 ntBASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 CT025523.1-201ENSMUST00000228318 694 ntBASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Vps53Q8CCB4 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms