Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm24216-201ENSMUST00000158259 117 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm43724-201ENSMUST00000197516 226 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Mir6994-201ENSMUST00000198985 73 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm43222-201ENSMUST00000199013 603 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm17918-201ENSMUST00000205315 574 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 AC122327.2-201ENSMUST00000220883 120 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 AC122327.3-201ENSMUST00000221852 120 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 AC166341.1-201ENSMUST00000223360 105 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm9403-201ENSMUST00000196299 2181 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm36981-201ENSMUST00000192340 4485 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm42940-201ENSMUST00000200361 2362 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm37255-201ENSMUST00000193302 3060 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm23662-201ENSMUST00000158046 111 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm23995-201ENSMUST00000158060 129 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm6808-201ENSMUST00000162341 807 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm5830-201ENSMUST00000049117 443 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm24041-201ENSMUST00000083115 156 ntBASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Celf2-223ENSMUST00000182851 3587 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Vmn2r30-201ENSMUST00000072475 3616 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a6Q8C6K9 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Gm14900-201ENSMUST00000120304 733 ntBASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Gm2950-201ENSMUST00000185530 520 ntBASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Gm6119-201ENSMUST00000193443 1206 ntBASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Gm2225-201ENSMUST00000209570 377 ntBASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Mir134-201ENSMUST00000083492 71 ntBASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Gm13245-201ENSMUST00000119646 260 ntBASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Gm22261-201ENSMUST00000158691 324 ntBASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Gm27004-201ENSMUST00000183300 727 ntBASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Gm37103-201ENSMUST00000191830 115 ntBASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Gm37758-201ENSMUST00000194275 629 ntBASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Gm37518-201ENSMUST00000194930 2603 ntBASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Gm43160-201ENSMUST00000196453 421 ntBASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Gm17997-201ENSMUST00000211801 840 ntBASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Gm45874-201ENSMUST00000212423 346 ntBASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col6a6Q8C6K9 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col6a6Q8C6K9 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col6a6Q8C6K9 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
Col6a6Q8C6K9 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col6a6Q8C6K9 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms