Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm42594-201ENSMUST00000199511 246 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm34583-203ENSMUST00000202586 454 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm44142-201ENSMUST00000203358 311 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm9375-201ENSMUST00000208899 903 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm7394-201ENSMUST00000209138 1032 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm8804-201ENSMUST00000212292 798 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 CU024910.1-201ENSMUST00000214310 418 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 AC153971.2-201ENSMUST00000214553 777 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 AC163631.1-201ENSMUST00000225041 598 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm6863-201ENSMUST00000052882 636 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 4930542C16Rik-201ENSMUST00000062438 1090 ntTSL 2 BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm10115-201ENSMUST00000076071 1228 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm37483-201ENSMUST00000194382 1484 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gm43533-201ENSMUST00000202933 2936 ntBASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim47Q8C0E3 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm42614-201ENSMUST00000198724 1554 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm7842-201ENSMUST00000217691 1379 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Defa-ps7-201ENSMUST00000117139 168 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm15913-201ENSMUST00000118492 331 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm14725-201ENSMUST00000120324 828 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm12593-201ENSMUST00000120981 743 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Snrpert-201ENSMUST00000121967 279 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm25553-201ENSMUST00000158076 79 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm4308-201ENSMUST00000179735 914 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm25284-201ENSMUST00000180345 141 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm27373-201ENSMUST00000184017 184 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm28628-201ENSMUST00000187006 264 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm28779-201ENSMUST00000189678 323 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm31230-201ENSMUST00000199725 785 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm5995-201ENSMUST00000204107 1273 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm44892-201ENSMUST00000208595 488 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm9373-201ENSMUST00000208724 599 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm18305-201ENSMUST00000216532 2128 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm18338-201ENSMUST00000222381 560 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm3565-201ENSMUST00000222670 609 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Diaph3-204ENSMUST00000226254 682 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm22748-201ENSMUST00000082493 136 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 AC127371.2-201ENSMUST00000228108 1933 ntBASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Trim47Q8C0E3 Gm15095-201ENSMUST00000118996 1430 ntBASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms