Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Sh3rf2Q8BZT2 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sh3rf2Q8BZT2 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sh3rf2Q8BZT2 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.6□□□□□ -1.35
Sh3rf2Q8BZT2 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sh3rf2Q8BZT2 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.6□□□□□ -1.35
Sh3rf2Q8BZT2 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Sh3rf2Q8BZT2 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sh3rf2Q8BZT2 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC6.6□□□□□ -1.35
Sh3rf2Q8BZT2 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm9005-201ENSMUST00000119908 607 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm7350-201ENSMUST00000120964 636 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm25387-201ENSMUST00000157813 132 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm17711-201ENSMUST00000172028 237 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm18833-201ENSMUST00000173218 862 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm22548-201ENSMUST00000174899 78 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm37901-201ENSMUST00000195107 514 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm44422-201ENSMUST00000204142 1025 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 AC122305.2-201ENSMUST00000215148 834 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm3266-201ENSMUST00000217832 591 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 A1cf-203ENSMUST00000224400 1204 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 AC122290.1-201ENSMUST00000225631 1078 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm20775-201ENSMUST00000100115 1851 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Gm42685-201ENSMUST00000200378 2390 ntBASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Sh3rf2Q8BZT2 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Sh3rf2Q8BZT2 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
Sh3rf2Q8BZT2 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.59□□□□□ -1.36
Sh3rf2Q8BZT2 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Sh3rf2Q8BZT2 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
Sh3rf2Q8BZT2 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.59□□□□□ -1.36
Sh3rf2Q8BZT2 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Sh3rf2Q8BZT2 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 Mir680-1-201ENSMUST00000102257 109 ntBASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 Gm26289-201ENSMUST00000104169 131 ntBASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 Gm13835-201ENSMUST00000118459 685 ntBASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 Gm12181-201ENSMUST00000121448 531 ntBASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 Gm23894-201ENSMUST00000158107 313 ntBASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 Gm27602-201ENSMUST00000183861 111 ntBASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 Gm37517-201ENSMUST00000194004 1289 ntBASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Sh3rf2Q8BZT2 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms