Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Gm25396-201ENSMUST00000103981 133 ntBASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Gm14756-201ENSMUST00000116395 240 ntBASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Gm15621-201ENSMUST00000119162 364 ntBASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Gm6987-201ENSMUST00000119319 428 ntBASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Gm12400-201ENSMUST00000120915 1003 ntBASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Gm4997-201ENSMUST00000154056 360 ntBASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Gm25395-201ENSMUST00000157343 272 ntBASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Gm26321-201ENSMUST00000157740 242 ntBASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Gm44411-201ENSMUST00000204172 349 ntBASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Gm7780-201ENSMUST00000214787 406 ntBASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 AV026068-220ENSMUST00000224153 1147 ntBASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Gm9839-201ENSMUST00000195252 1437 ntBASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.75□□□□□ -1.33
Ccdc40Q8BI79 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm12654-201ENSMUST00000120387 587 ntBASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm14038-201ENSMUST00000121500 807 ntBASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm17046-201ENSMUST00000168078 850 ntBASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm22990-201ENSMUST00000175427 89 ntBASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm27156-201ENSMUST00000184589 754 ntBASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm43377-201ENSMUST00000201640 455 ntBASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm18012-201ENSMUST00000204558 773 ntBASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm44147-201ENSMUST00000204658 94 ntBASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm9985-201ENSMUST00000044101 510 ntBASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc40Q8BI79 Gm45201-201ENSMUST00000207187 2679 ntBASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Gm2178-201ENSMUST00000104927 357 ntBASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Gm26023-201ENSMUST00000122722 313 ntBASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC6.73□□□□□ -1.33
Ccdc40Q8BI79 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms