Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Nup98Q6PFD9 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Nup98Q6PFD9 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Nup98Q6PFD9 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Nup98Q6PFD9 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Nup98Q6PFD9 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Nup98Q6PFD9 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Nup98Q6PFD9 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Nup98Q6PFD9 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Nup98Q6PFD9 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Nup98Q6PFD9 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Nup98Q6PFD9 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC7.39□□□□□ -1.23
Nup98Q6PFD9 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Nup98Q6PFD9 Gm10258-201ENSMUST00000091270 2123 ntBASIC7.39□□□□□ -1.23
Nup98Q6PFD9 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Nup98Q6PFD9 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Gm4853-201ENSMUST00000119359 394 ntBASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Gm14970-201ENSMUST00000122289 355 ntBASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Gm23662-201ENSMUST00000158046 111 ntBASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC7.38□□□□□ -1.23
Nup98Q6PFD9 AC124826.1-201ENSMUST00000221651 325 ntBASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Gm5830-201ENSMUST00000049117 443 ntBASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Gm12077-201ENSMUST00000117049 364 ntBASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Gm13193-201ENSMUST00000117275 225 ntBASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Gm15616-201ENSMUST00000118662 375 ntBASIC7.38□□□□□ -1.23
Nup98Q6PFD9 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 AC167222.2-201ENSMUST00000220014 295 ntBASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 AC154806.2-201ENSMUST00000227212 2385 ntBASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC7.38□□□□□ -1.23
Nup98Q6PFD9 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC7.38□□□□□ -1.23
Nup98Q6PFD9 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Nup98Q6PFD9 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Nup98Q6PFD9 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Nup98Q6PFD9 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Nup98Q6PFD9 Gm44022-201ENSMUST00000203708 5429 ntBASIC7.37□□□□□ -1.23
Nup98Q6PFD9 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Nup98Q6PFD9 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Nup98Q6PFD9 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC7.37□□□□□ -1.23
Nup98Q6PFD9 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Nup98Q6PFD9 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Nup98Q6PFD9 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Nup98Q6PFD9 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC7.37□□□□□ -1.23
Nup98Q6PFD9 Gm13818-201ENSMUST00000119441 511 ntBASIC7.37□□□□□ -1.23
Nup98Q6PFD9 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC7.37□□□□□ -1.23
Nup98Q6PFD9 Gm36939-201ENSMUST00000194889 439 ntBASIC7.37□□□□□ -1.23
Nup98Q6PFD9 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC7.37□□□□□ -1.23
Nup98Q6PFD9 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC7.37□□□□□ -1.23
Nup98Q6PFD9 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Nup98Q6PFD9 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Nup98Q6PFD9 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Nup98Q6PFD9 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Nup98Q6PFD9 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Nup98Q6PFD9 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Nup98Q6PFD9 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Nup98Q6PFD9 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nup98Q6PFD9 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup98Q6PFD9 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Nup98Q6PFD9 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup98Q6PFD9 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC7.36□□□□□ -1.23
Nup98Q6PFD9 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nup98Q6PFD9 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC7.36□□□□□ -1.23
Nup98Q6PFD9 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nup98Q6PFD9 Gm25826-201ENSMUST00000157090 137 ntBASIC7.36□□□□□ -1.23
Nup98Q6PFD9 Mir3097-201ENSMUST00000175356 67 ntBASIC7.36□□□□□ -1.23
Nup98Q6PFD9 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nup98Q6PFD9 Mir7235-201ENSMUST00000183796 56 ntBASIC7.36□□□□□ -1.23
Nup98Q6PFD9 Gm37203-201ENSMUST00000191618 385 ntBASIC7.36□□□□□ -1.23
Nup98Q6PFD9 Gm44837-201ENSMUST00000206863 717 ntBASIC7.36□□□□□ -1.23
Nup98Q6PFD9 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC7.36□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 118 ms