Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm12653-201ENSMUST00000117778 561 ntBASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm15181-201ENSMUST00000120142 177 ntBASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm12369-201ENSMUST00000121343 942 ntBASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm22235-201ENSMUST00000157085 110 ntBASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm23894-201ENSMUST00000158107 313 ntBASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm25374-201ENSMUST00000158158 101 ntBASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm25904-201ENSMUST00000158491 143 ntBASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm22548-201ENSMUST00000174899 78 ntBASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm24812-201ENSMUST00000175315 284 ntBASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm5283-201ENSMUST00000177874 334 ntBASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm29778-201ENSMUST00000201667 466 ntBASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm43850-201ENSMUST00000202021 578 ntBASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm18805-201ENSMUST00000206872 655 ntBASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm2996-201ENSMUST00000211398 537 ntBASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm5436-201ENSMUST00000058103 643 ntBASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm15500-201ENSMUST00000071523 894 ntBASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Upf3bQ3ULL6 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Gm8855-201ENSMUST00000118888 878 ntBASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Gm7058-201ENSMUST00000119209 902 ntBASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Gm8722-201ENSMUST00000121466 769 ntBASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Gm4152-201ENSMUST00000172675 259 ntBASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Gm24155-201ENSMUST00000175259 110 ntBASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Gm43048-201ENSMUST00000196101 388 ntBASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 AC157572.1-201ENSMUST00000227187 825 ntBASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.79□□□□□ -1.32
Upf3bQ3ULL6 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.78□□□□□ -1.32
Upf3bQ3ULL6 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms