Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm37289-201ENSMUST00000195409 1402 ntBASIC7.01□□□□□ -1.29
CiitaP79621 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
CiitaP79621 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CiitaP79621 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CiitaP79621 Gm45786-201ENSMUST00000213021 2278 ntBASIC7.01□□□□□ -1.29
CiitaP79621 Gm43719-201ENSMUST00000200088 2199 ntBASIC7.01□□□□□ -1.29
CiitaP79621 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
CiitaP79621 Gm45457-201ENSMUST00000209931 3089 ntBASIC7□□□□□ -1.29
CiitaP79621 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC7□□□□□ -1.29
CiitaP79621 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
CiitaP79621 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC7□□□□□ -1.29
CiitaP79621 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CiitaP79621 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC7□□□□□ -1.29
CiitaP79621 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC7□□□□□ -1.29
CiitaP79621 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7□□□□□ -1.29
CiitaP79621 Gm45290-201ENSMUST00000211177 3890 ntBASIC7□□□□□ -1.29
CiitaP79621 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC7□□□□□ -1.29
CiitaP79621 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CiitaP79621 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
CiitaP79621 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
CiitaP79621 Gm24989-201ENSMUST00000104461 88 ntBASIC7□□□□□ -1.29
CiitaP79621 Gm12565-201ENSMUST00000119004 649 ntBASIC7□□□□□ -1.29
CiitaP79621 Gm16511-201ENSMUST00000120019 564 ntBASIC7□□□□□ -1.29
CiitaP79621 Gm14054-201ENSMUST00000120744 704 ntBASIC7□□□□□ -1.29
CiitaP79621 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC7□□□□□ -1.29
CiitaP79621 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC7□□□□□ -1.29
CiitaP79621 Gm11545-201ENSMUST00000146507 375 ntBASIC7□□□□□ -1.29
CiitaP79621 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC7□□□□□ -1.29
CiitaP79621 Gm22690-201ENSMUST00000175054 110 ntBASIC7□□□□□ -1.29
CiitaP79621 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC7□□□□□ -1.29
CiitaP79621 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC7□□□□□ -1.29
CiitaP79621 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
CiitaP79621 Gm19087-201ENSMUST00000191430 946 ntBASIC7□□□□□ -1.29
CiitaP79621 Gm6074-201ENSMUST00000193340 451 ntBASIC7□□□□□ -1.29
CiitaP79621 Gm43233-201ENSMUST00000200491 616 ntBASIC7□□□□□ -1.29
CiitaP79621 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC7□□□□□ -1.29
CiitaP79621 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC7□□□□□ -1.29
CiitaP79621 Gm2225-201ENSMUST00000209570 377 ntBASIC7□□□□□ -1.29
CiitaP79621 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC7□□□□□ -1.29
CiitaP79621 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC7□□□□□ -1.29
CiitaP79621 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC7□□□□□ -1.29
CiitaP79621 Gm7780-201ENSMUST00000214787 406 ntBASIC7□□□□□ -1.29
CiitaP79621 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC7□□□□□ -1.29
CiitaP79621 CT030254.1-201ENSMUST00000225450 1078 ntBASIC7□□□□□ -1.29
CiitaP79621 Gm9788-201ENSMUST00000057038 906 ntBASIC7□□□□□ -1.29
CiitaP79621 Gm28392-201ENSMUST00000077630 393 ntBASIC7□□□□□ -1.29
CiitaP79621 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
CiitaP79621 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CiitaP79621 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC7□□□□□ -1.29
CiitaP79621 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC7□□□□□ -1.29
CiitaP79621 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC7□□□□□ -1.29
CiitaP79621 AC141476.1-201ENSMUST00000224988 3387 ntBASIC7□□□□□ -1.29
CiitaP79621 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
CiitaP79621 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC7□□□□□ -1.29
CiitaP79621 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
CiitaP79621 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CiitaP79621 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CiitaP79621 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CiitaP79621 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
CiitaP79621 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CiitaP79621 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
CiitaP79621 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CiitaP79621 Gm26289-201ENSMUST00000104169 131 ntBASIC6.99□□□□□ -1.29
CiitaP79621 Gm23485-201ENSMUST00000104181 155 ntBASIC6.99□□□□□ -1.29
CiitaP79621 Gm8692-201ENSMUST00000118102 438 ntBASIC6.99□□□□□ -1.29
CiitaP79621 Gm11256-201ENSMUST00000118109 829 ntBASIC6.99□□□□□ -1.29
CiitaP79621 Gm6382-201ENSMUST00000118873 942 ntBASIC6.99□□□□□ -1.29
CiitaP79621 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CiitaP79621 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6.99□□□□□ -1.29
CiitaP79621 Gm17137-202ENSMUST00000165729 957 ntBASIC6.99□□□□□ -1.29
CiitaP79621 Mir6337-201ENSMUST00000184194 105 ntBASIC6.99□□□□□ -1.29
CiitaP79621 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CiitaP79621 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CiitaP79621 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CiitaP79621 Gm43354-201ENSMUST00000196862 346 ntBASIC6.99□□□□□ -1.29
CiitaP79621 Gm43748-201ENSMUST00000202329 1233 ntBASIC6.99□□□□□ -1.29
CiitaP79621 BC049739-201ENSMUST00000202626 660 ntBASIC6.99□□□□□ -1.29
CiitaP79621 Gm45127-201ENSMUST00000205984 1015 ntBASIC6.99□□□□□ -1.29
CiitaP79621 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
CiitaP79621 Gm19212-201ENSMUST00000216642 862 ntBASIC6.99□□□□□ -1.29
CiitaP79621 AC104906.1-201ENSMUST00000218122 913 ntBASIC6.99□□□□□ -1.29
CiitaP79621 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.99□□□□□ -1.29
CiitaP79621 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.99□□□□□ -1.29
CiitaP79621 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CiitaP79621 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CiitaP79621 Gm22684-201ENSMUST00000082849 132 ntBASIC6.99□□□□□ -1.29
CiitaP79621 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
CiitaP79621 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
CiitaP79621 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
CiitaP79621 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
CiitaP79621 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CiitaP79621 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CiitaP79621 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.99□□□□□ -1.29
CiitaP79621 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
CiitaP79621 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CiitaP79621 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CiitaP79621 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
CiitaP79621 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CiitaP79621 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CiitaP79621 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 127.7 ms