Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.71□□□□□ -1.49
Sec61a1P61620 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.71□□□□□ -1.49
Sec61a1P61620 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Sec61a1P61620 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sec61a1P61620 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sec61a1P61620 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm38156-201ENSMUST00000194601 2260 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 AC122305.1-201ENSMUST00000214803 3921 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm9144-201ENSMUST00000101625 1008 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 n-R5s172-201ENSMUST00000104508 114 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sec61a1P61620 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm13566-201ENSMUST00000117428 1142 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm8534-201ENSMUST00000118553 766 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm12375-201ENSMUST00000119331 921 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm4914-201ENSMUST00000119757 459 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm15242-201ENSMUST00000122459 283 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC5.71□□□□□ -1.5
Sec61a1P61620 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm7289-201ENSMUST00000168993 734 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm3344-201ENSMUST00000169610 603 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm8609-201ENSMUST00000182967 998 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm27804-201ENSMUST00000185135 119 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm28438-201ENSMUST00000188299 345 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sec61a1P61620 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm36965-201ENSMUST00000193797 394 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm43141-201ENSMUST00000199695 274 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm45845-201ENSMUST00000207326 582 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm45279-201ENSMUST00000210315 391 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm2774-201ENSMUST00000213650 1165 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 AC142113.2-201ENSMUST00000217425 748 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm19047-201ENSMUST00000220922 1099 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm33312-201ENSMUST00000222443 332 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC5.71□□□□□ -1.5
Sec61a1P61620 AC168062.1-201ENSMUST00000228048 769 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sec61a1P61620 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Mir7b-201ENSMUST00000083557 111 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sec61a1P61620 AC154597.1-201ENSMUST00000224095 2713 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Sec61a1P61620 AC192333.5-201ENSMUST00000224620 2350 ntBASIC5.71□□□□□ -1.5
Sec61a1P61620 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sec61a1P61620 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sec61a1P61620 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sec61a1P61620 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sec61a1P61620 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.71□□□□□ -1.5
Sec61a1P61620 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sec61a1P61620 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sec61a1P61620 Gm43176-201ENSMUST00000199653 2989 ntBASIC5.7□□□□□ -1.5
Sec61a1P61620 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sec61a1P61620 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sec61a1P61620 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sec61a1P61620 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Sec61a1P61620 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sec61a1P61620 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Sec61a1P61620 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sec61a1P61620 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sec61a1P61620 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.7□□□□□ -1.5
Sec61a1P61620 AC158605.3-201ENSMUST00000218999 2538 ntBASIC5.7□□□□□ -1.5
Sec61a1P61620 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.7□□□□□ -1.5
Sec61a1P61620 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sec61a1P61620 Gm14865-201ENSMUST00000117523 494 ntBASIC5.7□□□□□ -1.5
Sec61a1P61620 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC5.7□□□□□ -1.5
Sec61a1P61620 Gm15129-201ENSMUST00000119673 279 ntBASIC5.7□□□□□ -1.5
Sec61a1P61620 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC5.7□□□□□ -1.5
Sec61a1P61620 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC5.7□□□□□ -1.5
Sec61a1P61620 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC5.7□□□□□ -1.5
Sec61a1P61620 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC5.7□□□□□ -1.5
Sec61a1P61620 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC5.7□□□□□ -1.5
Sec61a1P61620 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms