Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Sox3P53784 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Sox3P53784 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Sox3P53784 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.2□□□□□ -1.42
Sox3P53784 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.19□□□□□ -1.42
Sox3P53784 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Sox3P53784 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Sox3P53784 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Sox3P53784 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.19□□□□□ -1.42
Sox3P53784 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Sox3P53784 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Sox3P53784 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.19□□□□□ -1.42
Sox3P53784 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.19□□□□□ -1.42
Sox3P53784 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Sox3P53784 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Sox3P53784 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC6.19□□□□□ -1.42
Sox3P53784 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC6.19□□□□□ -1.42
Sox3P53784 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Sox3P53784 Gm28455-201ENSMUST00000189105 1290 ntBASIC6.19□□□□□ -1.42
Sox3P53784 Gm35323-201ENSMUST00000191836 499 ntBASIC6.19□□□□□ -1.42
Sox3P53784 Gm37430-201ENSMUST00000193039 196 ntBASIC6.19□□□□□ -1.42
Sox3P53784 Gm37187-201ENSMUST00000193425 341 ntBASIC6.19□□□□□ -1.42
Sox3P53784 Gm20770-201ENSMUST00000193474 694 ntBASIC6.19□□□□□ -1.42
Sox3P53784 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Gm34149-201ENSMUST00000203547 304 ntBASIC6.19□□□□□ -1.42
Sox3P53784 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Gm18600-201ENSMUST00000207205 505 ntBASIC6.19□□□□□ -1.42
Sox3P53784 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC6.19□□□□□ -1.42
Sox3P53784 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC6.19□□□□□ -1.42
Sox3P53784 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC6.19□□□□□ -1.42
Sox3P53784 Gm6056-201ENSMUST00000221253 488 ntBASIC6.19□□□□□ -1.42
Sox3P53784 AC211878.6-201ENSMUST00000221896 358 ntBASIC6.19□□□□□ -1.42
Sox3P53784 Gm33312-201ENSMUST00000222443 332 ntBASIC6.19□□□□□ -1.42
Sox3P53784 AC161374.1-201ENSMUST00000224191 794 ntBASIC6.19□□□□□ -1.42
Sox3P53784 CT033778.1-201ENSMUST00000224767 767 ntBASIC6.19□□□□□ -1.42
Sox3P53784 AC122290.1-201ENSMUST00000225631 1078 ntBASIC6.19□□□□□ -1.42
Sox3P53784 AC164426.1-201ENSMUST00000225745 929 ntBASIC6.19□□□□□ -1.42
Sox3P53784 AC125117.2-201ENSMUST00000228344 1140 ntBASIC6.19□□□□□ -1.42
Sox3P53784 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.19□□□□□ -1.42
Sox3P53784 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Sox3P53784 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Sox3P53784 Gm24405-201ENSMUST00000083033 167 ntBASIC6.19□□□□□ -1.42
Sox3P53784 Olfr687-201ENSMUST00000098154 938 ntBASIC6.19□□□□□ -1.42
Sox3P53784 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Sox3P53784 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Sox3P53784 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Sox3P53784 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Sox3P53784 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sox3P53784 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sox3P53784 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sox3P53784 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sox3P53784 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.18□□□□□ -1.42
Sox3P53784 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Sox3P53784 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sox3P53784 Gm37518-201ENSMUST00000194930 2603 ntBASIC6.18□□□□□ -1.42
Sox3P53784 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC6.18□□□□□ -1.42
Sox3P53784 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Sox3P53784 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.18□□□□□ -1.42
Sox3P53784 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Sox3P53784 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sox3P53784 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.18□□□□□ -1.42
Sox3P53784 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sox3P53784 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sox3P53784 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sox3P53784 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.18□□□□□ -1.42
Sox3P53784 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Sox3P53784 Rnu11-201ENSMUST00000104135 134 ntBASIC6.18□□□□□ -1.42
Sox3P53784 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.18□□□□□ -1.42
Sox3P53784 Gm13451-201ENSMUST00000117649 592 ntBASIC6.18□□□□□ -1.42
Sox3P53784 Gm6067-201ENSMUST00000121648 491 ntBASIC6.18□□□□□ -1.42
Sox3P53784 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Sox3P53784 Gm8648-201ENSMUST00000122457 221 ntBASIC6.18□□□□□ -1.42
Sox3P53784 Gm23426-201ENSMUST00000122483 318 ntBASIC6.18□□□□□ -1.42
Sox3P53784 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC6.18□□□□□ -1.42
Sox3P53784 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sox3P53784 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sox3P53784 Gm26162-201ENSMUST00000157793 132 ntBASIC6.18□□□□□ -1.42
Sox3P53784 Gm25574-201ENSMUST00000175245 249 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms