Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC9.68□□□□□ -0.86
Cux1P53564 Gm18348-201ENSMUST00000191227 820 ntBASIC9.68□□□□□ -0.86
Cux1P53564 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Cux1P53564 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Cux1P53564 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Cux1P53564 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cux1P53564 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Cux1P53564 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cux1P53564 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC9.68□□□□□ -0.86
Cux1P53564 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Cux1P53564 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cux1P53564 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cux1P53564 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cux1P53564 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cux1P53564 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Cux1P53564 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cux1P53564 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cux1P53564 Gm13870-201ENSMUST00000117214 1023 ntBASIC9.67□□□□□ -0.86
Cux1P53564 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cux1P53564 Gm23669-201ENSMUST00000157470 128 ntBASIC9.67□□□□□ -0.86
Cux1P53564 Mir3095-201ENSMUST00000175552 87 ntBASIC9.67□□□□□ -0.86
Cux1P53564 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Cux1P53564 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC9.67□□□□□ -0.86
Cux1P53564 AC134254.2-201ENSMUST00000221262 170 ntBASIC9.67□□□□□ -0.86
Cux1P53564 Gm4012-201ENSMUST00000221504 581 ntBASIC9.67□□□□□ -0.86
Cux1P53564 AC164618.3-201ENSMUST00000224863 681 ntBASIC9.67□□□□□ -0.86
Cux1P53564 AC107711.2-203ENSMUST00000227827 762 ntBASIC9.67□□□□□ -0.86
Cux1P53564 Mir375-201ENSMUST00000083682 64 ntBASIC9.67□□□□□ -0.86
Cux1P53564 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Cux1P53564 Gm37589-201ENSMUST00000193609 3994 ntBASIC9.67□□□□□ -0.86
Cux1P53564 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Cux1P53564 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Cux1P53564 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Cux1P53564 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Cux1P53564 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cux1P53564 Gm33167-201ENSMUST00000201933 2643 ntBASIC9.67□□□□□ -0.86
Cux1P53564 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cux1P53564 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cux1P53564 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cux1P53564 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cux1P53564 AC159006.2-201ENSMUST00000228734 4144 ntBASIC9.67□□□□□ -0.86
Cux1P53564 AC156025.2-201ENSMUST00000225907 1533 ntBASIC9.67□□□□□ -0.86
Cux1P53564 Gm15006-201ENSMUST00000121419 1122 ntBASIC9.66□□□□□ -0.86
Cux1P53564 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC9.66□□□□□ -0.86
Cux1P53564 Gm37511-201ENSMUST00000192901 294 ntBASIC9.66□□□□□ -0.86
Cux1P53564 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC9.66□□□□□ -0.86
Cux1P53564 Gm43054-201ENSMUST00000199495 884 ntBASIC9.66□□□□□ -0.86
Cux1P53564 Gm29778-201ENSMUST00000201667 466 ntBASIC9.66□□□□□ -0.86
Cux1P53564 Gm19900-201ENSMUST00000207285 576 ntBASIC9.66□□□□□ -0.86
Cux1P53564 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cux1P53564 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cux1P53564 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Cux1P53564 AC107453.1-201ENSMUST00000227490 3268 ntBASIC9.66□□□□□ -0.86
Cux1P53564 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cux1P53564 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC9.66□□□□□ -0.86
Cux1P53564 Gm44750-201ENSMUST00000206185 2223 ntBASIC9.66□□□□□ -0.86
Cux1P53564 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cux1P53564 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cux1P53564 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cux1P53564 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cux1P53564 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cux1P53564 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cux1P53564 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC9.66□□□□□ -0.86
Cux1P53564 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Cux1P53564 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Cux1P53564 Gm37238-201ENSMUST00000195552 2390 ntBASIC9.66□□□□□ -0.86
Cux1P53564 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC9.66□□□□□ -0.86
Cux1P53564 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Cux1P53564 Gm13533-201ENSMUST00000121104 177 ntBASIC9.66□□□□□ -0.86
Cux1P53564 Gm22106-201ENSMUST00000122544 127 ntBASIC9.66□□□□□ -0.86
Cux1P53564 Gm26211-201ENSMUST00000158578 129 ntBASIC9.66□□□□□ -0.86
Cux1P53564 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Cux1P53564 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC9.66□□□□□ -0.86
Cux1P53564 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Cux1P53564 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cux1P53564 Mir6337-201ENSMUST00000184194 105 ntBASIC9.66□□□□□ -0.86
Cux1P53564 Gm18444-201ENSMUST00000191239 629 ntBASIC9.66□□□□□ -0.86
Cux1P53564 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC9.66□□□□□ -0.86
Cux1P53564 Gm43946-201ENSMUST00000204058 886 ntBASIC9.66□□□□□ -0.86
Cux1P53564 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC9.66□□□□□ -0.86
Cux1P53564 AC112956.1-201ENSMUST00000213563 492 ntBASIC9.66□□□□□ -0.86
Cux1P53564 Gm18413-201ENSMUST00000221573 655 ntBASIC9.66□□□□□ -0.86
Cux1P53564 AC124826.1-201ENSMUST00000221651 325 ntBASIC9.66□□□□□ -0.86
Cux1P53564 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cux1P53564 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cux1P53564 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Cux1P53564 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cux1P53564 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cux1P53564 AC122305.1-201ENSMUST00000214803 3921 ntBASIC9.65□□□□□ -0.86
Cux1P53564 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cux1P53564 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cux1P53564 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cux1P53564 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cux1P53564 Gm37951-201ENSMUST00000192963 3032 ntBASIC9.65□□□□□ -0.86
Cux1P53564 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC9.65□□□□□ -0.86
Cux1P53564 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cux1P53564 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cux1P53564 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cux1P53564 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cux1P53564 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms