Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm38366-201ENSMUST00000193127 1934 ntBASIC8.5□□□□□ -1.05
Col18a1P39061 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Col18a1P39061 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Col18a1P39061 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col18a1P39061 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Col18a1P39061 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col18a1P39061 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Col18a1P39061 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC8.5□□□□□ -1.05
Col18a1P39061 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Col18a1P39061 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Col18a1P39061 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col18a1P39061 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col18a1P39061 Gm26078-201ENSMUST00000104067 128 ntBASIC8.5□□□□□ -1.05
Col18a1P39061 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col18a1P39061 Gm12077-201ENSMUST00000117049 364 ntBASIC8.5□□□□□ -1.05
Col18a1P39061 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC8.5□□□□□ -1.05
Col18a1P39061 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC8.5□□□□□ -1.05
Col18a1P39061 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col18a1P39061 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC8.5□□□□□ -1.05
Col18a1P39061 Gm36997-201ENSMUST00000195090 707 ntBASIC8.5□□□□□ -1.05
Col18a1P39061 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC8.5□□□□□ -1.05
Col18a1P39061 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Col18a1P39061 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC8.5□□□□□ -1.05
Col18a1P39061 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Col18a1P39061 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC8.5□□□□□ -1.05
Col18a1P39061 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Col18a1P39061 Gm3148-201ENSMUST00000203594 612 ntBASIC8.5□□□□□ -1.05
Col18a1P39061 Gm45276-201ENSMUST00000209549 1086 ntBASIC8.5□□□□□ -1.05
Col18a1P39061 CT030175.1-201ENSMUST00000220822 408 ntBASIC8.5□□□□□ -1.05
Col18a1P39061 AC132237.2-201ENSMUST00000221702 1209 ntBASIC8.5□□□□□ -1.05
Col18a1P39061 AC154767.2-201ENSMUST00000224584 414 ntBASIC8.5□□□□□ -1.05
Col18a1P39061 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col18a1P39061 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Col18a1P39061 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC8.5□□□□□ -1.05
Col18a1P39061 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Col18a1P39061 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Col18a1P39061 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Col18a1P39061 Gm28667-201ENSMUST00000189873 2171 ntBASIC8.5□□□□□ -1.05
Col18a1P39061 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Col18a1P39061 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Col18a1P39061 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC8.5□□□□□ -1.05
Col18a1P39061 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Col18a1P39061 Abhd2-201ENSMUST00000037315 6877 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Col18a1P39061 Gm4954-201ENSMUST00000135069 1601 ntBASIC8.49□□□□□ -1.05
Col18a1P39061 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Col18a1P39061 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Col18a1P39061 Gm43258-201ENSMUST00000200312 1950 ntBASIC8.49□□□□□ -1.05
Col18a1P39061 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC8.49□□□□□ -1.05
Col18a1P39061 Gm12734-201ENSMUST00000120228 948 ntBASIC8.49□□□□□ -1.05
Col18a1P39061 Gm22959-201ENSMUST00000122514 303 ntBASIC8.49□□□□□ -1.05
Col18a1P39061 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC8.49□□□□□ -1.05
Col18a1P39061 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC8.49□□□□□ -1.05
Col18a1P39061 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC8.49□□□□□ -1.05
Col18a1P39061 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC8.49□□□□□ -1.05
Col18a1P39061 AC156802.1-201ENSMUST00000223623 579 ntBASIC8.49□□□□□ -1.05
Col18a1P39061 AC154806.3-201ENSMUST00000227376 439 ntBASIC8.49□□□□□ -1.05
Col18a1P39061 AC154806.4-201ENSMUST00000227406 439 ntBASIC8.49□□□□□ -1.05
Col18a1P39061 AC158954.1-201ENSMUST00000228272 1006 ntBASIC8.49□□□□□ -1.05
Col18a1P39061 n-R5s69-201ENSMUST00000083872 119 ntBASIC8.49□□□□□ -1.05
Col18a1P39061 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC8.49□□□□□ -1.05
Col18a1P39061 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
Col18a1P39061 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Col18a1P39061 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Col18a1P39061 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Col18a1P39061 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Col18a1P39061 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Col18a1P39061 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Col18a1P39061 Gm44416-201ENSMUST00000204055 2066 ntBASIC8.49□□□□□ -1.05
Col18a1P39061 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Col18a1P39061 Gm38124-201ENSMUST00000191710 2581 ntBASIC8.49□□□□□ -1.05
Col18a1P39061 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col18a1P39061 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col18a1P39061 Ptprb-201ENSMUST00000092167 11911 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col18a1P39061 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col18a1P39061 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Col18a1P39061 Gm12937-201ENSMUST00000118333 448 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Gm14970-201ENSMUST00000122289 355 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Gm22492-201ENSMUST00000157192 297 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Gm22764-201ENSMUST00000158370 92 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Gm22094-201ENSMUST00000158976 117 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Gm15838-201ENSMUST00000161575 180 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Col18a1P39061 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC8.48□□□□□ -1.05
Col18a1P39061 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col18a1P39061 Gm38670-201ENSMUST00000199248 77 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Gm42452-201ENSMUST00000199749 617 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Gm18007-201ENSMUST00000205019 844 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Gm45249-201ENSMUST00000211021 348 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Gm5373-201ENSMUST00000212113 1050 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 AC122371.2-201ENSMUST00000220583 366 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 AC154424.1-201ENSMUST00000225883 799 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 AC166369.2-201ENSMUST00000228403 308 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Col18a1P39061 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Col18a1P39061 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Col18a1P39061 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Col18a1P39061 Gm44436-201ENSMUST00000204200 1494 ntBASIC8.48□□□□□ -1.05
Col18a1P39061 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col18a1P39061 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 162.2 ms