Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.42□□□□□ -1.54
Cd28P31041 Gm7393-201ENSMUST00000172650 739 ntBASIC5.42□□□□□ -1.54
Cd28P31041 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cd28P31041 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cd28P31041 Gm28006-201ENSMUST00000183841 122 ntBASIC5.42□□□□□ -1.54
Cd28P31041 Gm27193-201ENSMUST00000184217 586 ntBASIC5.42□□□□□ -1.54
Cd28P31041 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cd28P31041 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cd28P31041 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC5.42□□□□□ -1.54
Cd28P31041 Gm18012-201ENSMUST00000204558 773 ntBASIC5.42□□□□□ -1.54
Cd28P31041 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC5.42□□□□□ -1.54
Cd28P31041 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cd28P31041 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC5.42□□□□□ -1.54
Cd28P31041 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC5.42□□□□□ -1.54
Cd28P31041 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC5.42□□□□□ -1.54
Cd28P31041 Gm18940-201ENSMUST00000222518 871 ntBASIC5.42□□□□□ -1.54
Cd28P31041 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC5.42□□□□□ -1.54
Cd28P31041 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cd28P31041 Gm5446-201ENSMUST00000091762 784 ntBASIC5.42□□□□□ -1.54
Cd28P31041 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Cd28P31041 Gm19093-201ENSMUST00000210671 1454 ntBASIC5.42□□□□□ -1.54
Cd28P31041 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Cd28P31041 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.42□□□□□ -1.54
Cd28P31041 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cd28P31041 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cd28P31041 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.42□□□□□ -1.54
Cd28P31041 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cd28P31041 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cd28P31041 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cd28P31041 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cd28P31041 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cd28P31041 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cd28P31041 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Cd28P31041 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cd28P31041 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cd28P31041 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.41□□□□□ -1.54
Cd28P31041 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cd28P31041 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cd28P31041 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.41□□□□□ -1.54
Cd28P31041 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cd28P31041 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.41□□□□□ -1.54
Cd28P31041 Gm43981-201ENSMUST00000203285 1467 ntBASIC5.41□□□□□ -1.54
Cd28P31041 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.41□□□□□ -1.54
Cd28P31041 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cd28P31041 Gm23834-201ENSMUST00000104436 129 ntBASIC5.41□□□□□ -1.54
Cd28P31041 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC5.41□□□□□ -1.54
Cd28P31041 Gm14098-201ENSMUST00000119295 623 ntBASIC5.41□□□□□ -1.54
Cd28P31041 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cd28P31041 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.41□□□□□ -1.54
Cd28P31041 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.41□□□□□ -1.54
Cd28P31041 Gm22990-201ENSMUST00000175427 89 ntBASIC5.41□□□□□ -1.54
Cd28P31041 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC5.41□□□□□ -1.54
Cd28P31041 Gm27360-201ENSMUST00000183487 80 ntBASIC5.41□□□□□ -1.54
Cd28P31041 Gm27299-201ENSMUST00000184593 103 ntBASIC5.41□□□□□ -1.54
Cd28P31041 Gm18875-201ENSMUST00000188563 882 ntBASIC5.41□□□□□ -1.54
Cd28P31041 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC5.41□□□□□ -1.54
Cd28P31041 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cd28P31041 Gm17895-201ENSMUST00000194028 874 ntBASIC5.41□□□□□ -1.54
Cd28P31041 Gm20690-202ENSMUST00000195126 355 ntBASIC5.41□□□□□ -1.54
Cd28P31041 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC5.41□□□□□ -1.54
Cd28P31041 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cd28P31041 Gm43561-201ENSMUST00000199866 448 ntBASIC5.41□□□□□ -1.54
Cd28P31041 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC5.41□□□□□ -1.54
Cd28P31041 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC5.41□□□□□ -1.54
Cd28P31041 Gm5324-201ENSMUST00000208115 476 ntBASIC5.41□□□□□ -1.54
Cd28P31041 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC5.41□□□□□ -1.54
Cd28P31041 Gm6885-201ENSMUST00000217261 372 ntBASIC5.41□□□□□ -1.54
Cd28P31041 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC5.41□□□□□ -1.54
Cd28P31041 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cd28P31041 Gm6054-201ENSMUST00000078052 378 ntBASIC5.41□□□□□ -1.54
Cd28P31041 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cd28P31041 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.41□□□□□ -1.54
Cd28P31041 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Cd28P31041 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cd28P31041 Gm44045-201ENSMUST00000204906 2520 ntBASIC5.41□□□□□ -1.54
Cd28P31041 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Cd28P31041 Gm43128-201ENSMUST00000202212 1621 ntBASIC5.41□□□□□ -1.54
Cd28P31041 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
Cd28P31041 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cd28P31041 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cd28P31041 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.4□□□□□ -1.54
Cd28P31041 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cd28P31041 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cd28P31041 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cd28P31041 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cd28P31041 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cd28P31041 AC159196.3-201ENSMUST00000224307 1841 ntBASIC5.4□□□□□ -1.54
Cd28P31041 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
Cd28P31041 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Cd28P31041 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cd28P31041 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Cd28P31041 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cd28P31041 Gm13988-201ENSMUST00000119363 288 ntBASIC5.4□□□□□ -1.54
Cd28P31041 Gm11553-201ENSMUST00000120682 240 ntBASIC5.4□□□□□ -1.54
Cd28P31041 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.4□□□□□ -1.54
Cd28P31041 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC5.4□□□□□ -1.54
Cd28P31041 Gm22604-201ENSMUST00000157604 311 ntBASIC5.4□□□□□ -1.54
Cd28P31041 Gm25487-201ENSMUST00000158725 125 ntBASIC5.4□□□□□ -1.54
Cd28P31041 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cd28P31041 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms